RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 YIPF1Q9Y548 306 aa9.16□□□□□ -0.94
SNX20-203ENST00000423026 PSAT1Q9Y617 370 aa9.16□□□□□ -0.94
SNX20-203ENST00000423026 USH1CQ9Y6N9 552 aa9.16□□□□□ -0.94
SNX20-203ENST00000423026 TPP1O14773 563 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 PEX11BO96011 259 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 HMGA1P17096 107 aaKnown RBP9.15□□□□□ -0.94
SNX20-203ENST00000423026 NMBRP28336 390 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 ADRA1AP35348 466 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 PPM1AP35813 382 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 HADHAP40939 763 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 ABL2P42684 1182 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 GJA8P48165 433 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 EPHB3P54753 998 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 CSE1LP55060 971 aaKnown RBP9.15□□□□□ -0.94
SNX20-203ENST00000423026 WNT3AP56704 352 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 SERINC3Q13530 473 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 RAB33AQ14088 237 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 POU6F1Q14863 301 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 TAF11Q15544 211 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 PCSK7Q16549 785 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 INSCQ1MX18 579 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 NADSYN1Q6IA69 706 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 RANBP10Q6VN20 620 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 OTOAQ7RTW8 1153 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 DDX53Q86TM3 631 aaKnown RBP9.15□□□□□ -0.94
SNX20-203ENST00000423026 NUDCD3Q8IVD9 361 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 BBS5Q8N3I7 341 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 TEX26Q8N6G2 289 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 CFAP61Q8NHU2 1237 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 GABPB2Q8TAK5 448 aaPredicted RBP9.15□□□□□ -0.94
SNX20-203ENST00000423026 AZIN2Q96A70 460 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 IMP4Q96G21 291 aaKnown RBP9.15□□□□□ -0.94
SNX20-203ENST00000423026 TRMT2BQ96GJ1 504 aaKnown RBP9.15□□□□□ -0.94
SNX20-203ENST00000423026 PAWRQ96IZ0 340 aaKnown RBP9.15□□□□□ -0.94
SNX20-203ENST00000423026 KLHL5Q96PQ7 755 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 YME1L1Q96TA2 773 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 DDX50Q9BQ39 737 aaKnown RBP9.15□□□□□ -0.94
SNX20-203ENST00000423026 PRKD2Q9BZL6 878 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 RXFP1Q9HBX9 757 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 MRM3Q9HC36 420 aaKnown RBP9.15□□□□□ -0.94
SNX20-203ENST00000423026 MRPL17Q9NRX2 175 aaKnown RBP9.15□□□□□ -0.94
SNX20-203ENST00000423026 IARS2Q9NSE4 1012 aaKnown RBP9.15□□□□□ -0.94
SNX20-203ENST00000423026 STK39Q9UEW8 545 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 MAFFQ9ULX9 164 aa9.15□□□□□ -0.94
SNX20-203ENST00000423026 LTBP2Q14767 1821 aa9.15□□□□□ -0.95
SNX20-203ENST00000423026 KLF11O14901 512 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 BIRC5O15392 142 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 COCHO43405 550 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 DCTN3O75935 186 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 GJB5O95377 273 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 ALDOAP04075 364 aaKnown RBP9.14□□□□□ -0.95
SNX20-203ENST00000423026 MPOP05164 745 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 KRT16P08779 473 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 CSF2RAP15509 400 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 BGNP21810 368 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 SERPINB8P50452 374 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 LIMK2P53671 638 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 CDH4P55283 916 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 WDR5P61964 334 aaKnown RBP9.14□□□□□ -0.95
SNX20-203ENST00000423026 DEFB103AP81534 67 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 CREMQ03060 361 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 SLC10A7Q0GE19 358 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 CCDC15Q0P6D6 951 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 PLD1Q13393 1074 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 SMAD1Q15797 465 aaKnown RBP9.14□□□□□ -0.95
SNX20-203ENST00000423026 DBN1Q16643 649 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 UGP2Q16851 508 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 C5orf22Q49AR2 442 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 TMCO4Q5TGY1 634 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 DENND5AQ6IQ26 1287 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 FBXO46Q6PJ61 603 aaPredicted RBP9.14□□□□□ -0.95
SNX20-203ENST00000423026 CIR1Q86X95 450 aaPredicted RBP9.14□□□□□ -0.95
SNX20-203ENST00000423026 DENND1CQ8IV53 801 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 GALNT15Q8N3T1 639 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 RAB3IL1Q8TBN0 382 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 ZNF398Q8TD17 642 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 E2F7Q96AV8 911 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 VWCEQ96DN2 955 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 ZNF419Q96HQ0 510 aaPredicted RBP9.14□□□□□ -0.95
SNX20-203ENST00000423026 MRGPRX2Q96LB1 330 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 AGAP2Q99490 1192 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 TRIM55Q9BYV6 548 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 MAGEH1Q9H213 219 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.14□□□□□ -0.95
SNX20-203ENST00000423026 TCAF1Q9Y4C2 921 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 PRAMEF11O60813 436 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 CD86P42081 329 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 MAXP61244 160 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 TMPRSS15P98073 1019 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 TNK2Q07912 1038 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 TWF1Q12792 350 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 LAMB3Q13751 1172 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 THOC5Q13769 683 aaKnown RBP9.14□□□□□ -0.95
SNX20-203ENST00000423026 PDE1CQ14123 709 aaPredicted RBP9.14□□□□□ -0.95
SNX20-203ENST00000423026 SEPT6Q14141 434 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 ZNF235Q14590 738 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 LRRC26Q2I0M4 334 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 IL31Q6EBC2 164 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 FSTL4Q6MZW2 842 aa9.14□□□□□ -0.95
SNX20-203ENST00000423026 RFWD3Q6PCD5 774 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms