RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 GSRP00390 522 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 STIP1P31948 543 aaKnown RBP15.93■□□□□ 0.14
DDX55-203ENST00000421670 SCNN1BP51168 640 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 SNRPD1P62314 119 aaKnown RBP15.93■□□□□ 0.14
DDX55-203ENST00000421670 MRPS25P82663 173 aaKnown RBP15.93■□□□□ 0.14
DDX55-203ENST00000421670 DSC2Q02487 901 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 TRIP13Q15645 432 aaPredicted RBP15.93■□□□□ 0.14
DDX55-203ENST00000421670 CARD16Q5EG05 197 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 PID1Q7Z2X4 250 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 CACUL1Q86Y37 369 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 CHST14Q8NCH0 376 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 GRIN3AQ8TCU5 1115 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 CLDN23Q96B33 292 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 NSMCE3Q96MG7 304 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 VAT1Q99536 393 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 CARD6Q9BX69 1037 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 ZDHHC6Q9H6R6 413 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 L2HGDHQ9H9P8 463 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 PCYOX1Q9UHG3 505 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 EVLQ9UI08 416 aaPredicted RBP15.93■□□□□ 0.14
DDX55-203ENST00000421670 BPTFQ12830 3046 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 KMT2EQ8IZD2 1858 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 MYLKQ15746 1914 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 A0A1W2PQF6 199 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 OPHN1O60890 802 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 GCATO75600 419 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 ZNF189O75820 626 aaPredicted RBP15.92■□□□□ 0.14
DDX55-203ENST00000421670 ECEL1O95672 775 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 CR2P20023 1033 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 HOXD11P31277 338 aaPredicted RBP15.92■□□□□ 0.14
DDX55-203ENST00000421670 HSPA9P38646 679 aaKnown RBP15.92■□□□□ 0.14
DDX55-203ENST00000421670 RECQLP46063 649 aaPredicted RBP15.92■□□□□ 0.14
DDX55-203ENST00000421670 VPS41P49754 854 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 STARD3Q14849 445 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 EOGTQ5NDL2 527 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 ALG1LQ6GMV1 187 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 TMEM92Q6UXU6 159 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 ARHGEF18Q6ZSZ5 1173 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 STK40Q8N2I9 435 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 GRK7Q8WTQ7 553 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 SEMA3CQ99985 751 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 COL25A1Q9BXS0 654 aaPredicted RBP15.92■□□□□ 0.14
DDX55-203ENST00000421670 CHRDQ9H2X0 955 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 GLOD4Q9HC38 313 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 PRSS16Q9NQE7 514 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 RSPH14Q9UHP6 348 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 TRHDEQ9UKU6 1024 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 CTAGE15A4D2H0 777 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 CHURC1-FNTBB4DL54 471 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 SYNCRIPO60506 623 aaKnown RBP15.92■□□□□ 0.14
DDX55-203ENST00000421670 CTAGE8P0CG41 777 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 PSMB4P28070 264 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 RPS9P46781 194 aaKnown RBP15.92■□□□□ 0.14
DDX55-203ENST00000421670 DR1Q01658 176 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 LMNB2Q03252 620 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 NIPAL4Q0D2K0 466 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 CAMK2GQ13555 558 aaPredicted RBP15.92■□□□□ 0.14
DDX55-203ENST00000421670 IHHQ14623 411 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 P3H1Q32P28 736 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 HSF5Q4G112 596 aaPredicted RBP15.92■□□□□ 0.14
DDX55-203ENST00000421670 FAXCQ5TGI0 409 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 SRLQ86TD4 932 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 CTAGE6Q86UF2 777 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 CTAGE4Q8IX94 777 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 CEP112Q8N8E3 955 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 LRRN4CLQ8ND94 238 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 MNS1Q8NEH6 495 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 SPATA22Q8NHS9 363 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 ARRDC2Q8TBH0 407 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 VOPP1Q96AW1 172 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 NUDCD1Q96RS6 583 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 RBM15Q96T37 977 aaKnown RBP eCLIP15.92■□□□□ 0.141e-7■■□□□ 13.4
DDX55-203ENST00000421670 GBA3Q9H227 469 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 EPHX3Q9H6B9 360 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 NOD2Q9HC29 1040 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 SCUBE2Q9NQ36 999 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 HAUS2Q9NVX0 235 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 SUN2Q9UH99 717 aa15.92■□□□□ 0.14
DDX55-203ENST00000421670 EML5Q05BV3 1969 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 TARSL2A2RTX5 802 aaKnown RBP15.91■□□□□ 0.14
DDX55-203ENST00000421670 TNFRSF10AO00220 468 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 TTI1O43156 1089 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 PIGNO95427 931 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 METTL18O95568 372 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 GAS8O95995 478 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 KRT14P02533 472 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 CTSLP07711 333 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 MMP2P08253 660 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 AOC1P19801 751 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 RPL22P35268 128 aaKnown RBP15.91■□□□□ 0.14
DDX55-203ENST00000421670 CD86P42081 329 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 PTGIRP43119 386 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 NSUN2Q08J23 767 aaKnown RBP eCLIP15.91■□□□□ 0.14
DDX55-203ENST00000421670 MTAPQ13126 283 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 ELAVL3Q14576 367 aaKnown RBP15.91■□□□□ 0.14
DDX55-203ENST00000421670 PPP1R7Q15435 360 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 CRY1Q16526 586 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 ITPRIPL1Q6GPH6 555 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 NOA1Q8NC60 698 aaKnown RBP15.91■□□□□ 0.14
DDX55-203ENST00000421670 OR8D1Q8WZ84 308 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms