RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PAPD7Q5XG87 772 aaKnown RBP10.86□□□□□ -0.67
PTCH1-206ENST00000421141 ZNF555Q8NEP9 628 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 OR56A4Q8NGH8 313 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 SFXN1Q9H9B4 322 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 RGS17Q9UGC6 210 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-206ENST00000421141 PCDHGC3Q9UN70 934 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 HS6ST1O60243 411 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 POP4O95707 220 aaKnown RBP10.86□□□□□ -0.67
PTCH1-206ENST00000421141 CTPS1P17812 591 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 WASP42768 502 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 PEX5P50542 639 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 CATSPER1Q8NEC5 780 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 ASB2Q96Q27 587 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 THUMPD3Q9BV44 507 aaKnown RBP10.86□□□□□ -0.67
PTCH1-206ENST00000421141 B3GNT5Q9BYG0 378 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 ACP6Q9NPH0 428 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 CROCCQ5TZA2 2017 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 HLA-DPA1P20036 260 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 CASKIN2Q8WXE0 1202 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 PHF21BQ96EK2 531 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 KLF6Q99612 283 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-206ENST00000421141 MYOCQ99972 504 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 ELK3P41970 407 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 CCR3P51677 355 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 RPL7AP62424 266 aaKnown RBP10.85□□□□□ -0.67
PTCH1-206ENST00000421141 GALNT3Q14435 633 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 TOMM20Q15388 145 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 BPIFA1Q9NP55 256 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 PAPPAQ13219 1627 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 KCNU1A8MYU2 1149 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 DNALI1O14645 258 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-206ENST00000421141 EIF2S1P05198 315 aaKnown RBP10.85□□□□□ -0.67
PTCH1-206ENST00000421141 RHOQP17081 205 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 CBX2Q14781 532 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-206ENST00000421141 FAM45BPQ6NSW5 357 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 TAPT1Q6NXT6 567 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 KRT78Q8N1N4 520 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 FAM45AQ8TCE6 357 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 MYO1GB0I1T2 1018 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 FAM107AO95990 144 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 ADRA1DP25100 572 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 SKIV2L2P42285 1042 aaKnown RBP10.85□□□□□ -0.67
PTCH1-206ENST00000421141 DGKEP52429 567 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 STX5Q13190 355 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-206ENST00000421141 OR6K2Q8NGY2 324 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 IRF7Q92985 503 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 B3GALT6Q96L58 329 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 LPIN3Q9BQK8 851 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 WNT7AO00755 349 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 STBD1O95210 358 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 SOD2P04179 222 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 MAPKAPK2P49137 400 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 MEA1Q16626 185 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 DNAL1Q4LDG9 190 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 NLRP14Q86W24 1093 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 STX19Q8N4C7 294 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 VMP1Q96GC9 406 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 CDC42EP4Q9H3Q1 356 aaKnown RBP10.85□□□□□ -0.67
PTCH1-206ENST00000421141 IL1RL2Q9HB29 575 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 GULP1Q9UBP9 304 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 PAPPA2Q9BXP8 1791 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 SKAP2O75563 359 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-206ENST00000421141 UQCRBP14927 111 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 MMP8P22894 467 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 PBX3P40426 434 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 CYP4F8P98187 520 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 PPP1R10Q96QC0 940 aaKnown RBP10.85□□□□□ -0.67
PTCH1-206ENST00000421141 SH3BP4Q9P0V3 963 aa10.85□□□□□ -0.67
PTCH1-206ENST00000421141 YBEYP58557 167 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-206ENST00000421141 MAXP61244 160 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 KCNMA1Q12791 1236 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 CYLC2Q14093 348 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-206ENST00000421141 GNA13Q14344 377 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 LPIN1Q14693 890 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 PDGFRLQ15198 375 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 PRRC2BQ5JSZ5 2229 aaKnown RBP10.84□□□□□ -0.67
PTCH1-206ENST00000421141 MORN1Q5T089 497 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 NEPROQ6NW34 567 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 GALNT13Q8IUC8 556 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 ICA1LQ8NDH6 482 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 ACDQ96AP0 544 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 MAGEH1Q9H213 219 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 AGO3Q9H9G7 860 aaKnown RBP10.84□□□□□ -0.67
PTCH1-206ENST00000421141 CDHR5Q9HBB8 845 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 TAS2R14Q9NYV8 317 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 TRPC4Q9UBN4 977 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 TLR6Q9Y2C9 796 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 NCANO14594 1321 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 GPR15P49685 360 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 TMEM63BQ5T3F8 832 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 NPNTQ6UXI9 565 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 PAGE2Q7Z2X7 111 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 MILR1Q7Z6M3 343 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 CMTR2Q8IYT2 770 aaKnown RBP10.84□□□□□ -0.67
PTCH1-206ENST00000421141 SH3RF2Q8TEC5 729 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 LACRTQ9GZZ8 138 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 CLIC5Q9NZA1 410 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 URB1O60287 2271 aaKnown RBP10.84□□□□□ -0.67
PTCH1-206ENST00000421141 ADGRA3Q8IWK6 1321 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms