RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 ANKRD52Q8NB46 1076 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 AGBL5Q8NDL9 886 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 PARD3BQ8TEW8 1205 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 LURAP1Q96LR2 239 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 IPO9Q96P70 1041 aaKnown RBP9.19□□□□□ -0.94
TRIM39-206ENST00000420746 CNGB3Q9NQW8 809 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 CGNQ9P2M7 1197 aaKnown RBP9.19□□□□□ -0.94
TRIM39-206ENST00000420746 CCDC39Q9UFE4 941 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 TLK1Q9UKI8 766 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 POLHQ9Y253 713 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 HS3ST2Q9Y278 367 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 DAAM1Q9Y4D1 1078 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 PCDHB3Q9Y5E6 796 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 FADS3Q9Y5Q0 445 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 LRRIQ3A6PVS8 624 aaPredicted RBP9.18□□□□□ -0.94
TRIM39-206ENST00000420746 YJEFN3A6XGL0 299 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 E7ENQ6 273 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 AGRPO00253 132 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 XPO1O14980 1071 aaKnown RBP9.18□□□□□ -0.94
TRIM39-206ENST00000420746 ZW10O43264 779 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 PDGFAP04085 211 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 ADRB3P13945 408 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 CTSEP14091 401 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 ITGA3P26006 1051 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 MAN1A1P33908 653 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 PTGER4P35408 488 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 CASP4P49662 377 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 CYP2J2P51589 502 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 B4GALNT1Q00973 533 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 CENPCQ03188 943 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 ARHGEF7Q14155 803 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 HLTFQ14527 1009 aaKnown RBP eCLIP9.18□□□□□ -0.94
TRIM39-206ENST00000420746 EDRF1Q3B7T1 1238 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 TTC39BQ5VTQ0 682 aaPredicted RBP9.18□□□□□ -0.94
TRIM39-206ENST00000420746 GDF7Q7Z4P5 450 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 CCDC65Q8IXS2 484 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 TTC39CQ8N584 583 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 OR2A12Q8NGT7 310 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 ZNF507Q8TCN5 953 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 PLEKHO2Q8TD55 490 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 NANOS1Q8WY41 292 aaKnown RBP9.18□□□□□ -0.94
TRIM39-206ENST00000420746 ART4Q93070 314 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 ELMO3Q96BJ8 720 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 CENPTQ96BT3 561 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 ALG14Q96F25 216 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 FCRL2Q96LA5 508 aaPredicted RBP9.18□□□□□ -0.94
TRIM39-206ENST00000420746 ZPBPQ9BS86 351 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 LRRC4Q9HBW1 653 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 SLC39A1Q9NY26 324 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 FAM13BQ9NYF5 915 aa9.18□□□□□ -0.94
TRIM39-206ENST00000420746 IGHV5-10-1A0A0J9YXX1 117 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 TCAF2A6NFQ2 919 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 TMEM110-MUSTN1A8MSY1 372 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 TSPAN6O43657 245 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 RASGRP1O95267 797 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 RECKO95980 971 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 CSTF2P33240 577 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRIM39-206ENST00000420746 PEX5P50542 639 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 CLCN6P51797 869 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 LIMK2P53671 638 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 ADIGQ0VDE8 80 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 MAP7Q14244 749 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 NR1D2Q14995 579 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 NADK2Q4G0N4 442 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 C14orf28Q4W4Y0 310 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 ATP1A1-AS1Q5TC04 95 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 PAPD7Q5XG87 772 aaKnown RBP9.17□□□□□ -0.94
TRIM39-206ENST00000420746 SP5Q6BEB4 398 aaPredicted RBP9.17□□□□□ -0.94
TRIM39-206ENST00000420746 SPOPLQ6IQ16 392 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 CXorf57Q6NSI4 855 aaKnown RBP9.17□□□□□ -0.94
TRIM39-206ENST00000420746 C16orf46Q6P387 395 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 CENPQQ7L2Z9 268 aaPredicted RBP9.17□□□□□ -0.94
TRIM39-206ENST00000420746 EPM2AIP1Q7L775 607 aaPredicted RBP9.17□□□□□ -0.94
TRIM39-206ENST00000420746 ZNF438Q7Z4V0 828 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 LGI2Q8N0V4 545 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 MMP21Q8N119 569 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 CCAR2Q8N163 923 aaKnown RBP9.17□□□□□ -0.94
TRIM39-206ENST00000420746 SIX6OS1Q8N1H7 587 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 IRGQQ8WZA9 623 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 NDRG1Q92597 394 aaKnown RBP9.17□□□□□ -0.94
TRIM39-206ENST00000420746 RAB7BQ96AH8 199 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 SLC39A13Q96H72 371 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 FAXDC2Q96IV6 333 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 CCDC74BQ96LY2 380 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 SERPINB11Q96P15 392 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 RBM15Q96T37 977 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRIM39-206ENST00000420746 IMPG2Q9BZV3 1241 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 MLXIPLQ9NP71 852 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 LRIT1Q9P2V4 623 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 TLR6Q9Y2C9 796 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 TMEM184BQ9Y519 407 aaPredicted RBP9.17□□□□□ -0.94
TRIM39-206ENST00000420746 PCDHGA9Q9Y5G4 932 aaKnown RBP9.17□□□□□ -0.94
TRIM39-206ENST00000420746 OAS3Q9Y6K5 1087 aaKnown RBP9.17□□□□□ -0.94
TRIM39-206ENST00000420746 UNC13CQ8NB66 2214 aa9.17□□□□□ -0.94
TRIM39-206ENST00000420746 TRPM6Q9BX84 2022 aa9.16□□□□□ -0.94
TRIM39-206ENST00000420746 IGLON5A6NGN9 336 aa9.16□□□□□ -0.94
TRIM39-206ENST00000420746 CLIC2O15247 247 aa9.16□□□□□ -0.94
TRIM39-206ENST00000420746 EXOC3O60645 756 aa9.16□□□□□ -0.94
TRIM39-206ENST00000420746 LRCH4O75427 683 aa9.16□□□□□ -0.94
TRIM39-206ENST00000420746 FAM155BO75949 473 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms