RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 C6orf132Q5T0Z8 1188 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 ARTNQ5T4W7 220 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 FOXR1Q6PIV2 292 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 OLFML1Q6UWY5 402 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 PARS2Q7L3T8 475 aaKnown RBP10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 SETD3Q86TU7 594 aaPredicted RBP10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 RBFAQ8N0V3 343 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 BTN2A2Q8WVV5 523 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 ASB12Q8WXK4 309 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 CCDC34Q96HJ3 373 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 FEM1CQ96JP0 617 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 IL12RB2Q99665 862 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 CCDC3Q9BQI4 270 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 LRRC61Q9BV99 259 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 FAM117AQ9C073 453 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 CEP44Q9C0F1 390 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 TCEAL2Q9H3H9 227 aaPredicted RBP10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 ACP6Q9NPH0 428 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 PIGVQ9NUD9 493 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 SPASTQ9UBP0 616 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 APOBEC3BQ9UH17 382 aaKnown RBP10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 PNMA8BQ9ULN7 279 aaPredicted RBP10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 ZDHHC9Q9Y397 364 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 TRPM6Q9BX84 2022 aa10.4□□□□□ -0.75
TNFAIP3-202ENST00000420009 RP1P56715 2156 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 KIF26BQ2KJY2 2108 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 PLD2O14939 933 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 THAP12O43422 761 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 DAB1O75553 588 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 GRAP2O75791 330 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 ZMPSTE24O75844 475 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 SLC5A2P31639 672 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 ABL2P42684 1182 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 RECQLP46063 649 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 SRSF6Q13247 344 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 EIF3IQ13347 325 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 SPIDRQ14159 915 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 CCDC40Q4G0X9 1142 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 PRRT3Q5FWE3 981 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 EFHC1Q5JVL4 640 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 TTI2Q6NXR4 508 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 ATG14Q6ZNE5 492 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 FAM183BPQ6ZVS7 135 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 SLC26A9Q7LBE3 791 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 B3GNT8Q7Z7M8 397 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 HSCBQ8IWL3 235 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 TRIM59Q8IWR1 403 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 PHACTR4Q8IZ21 702 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 FMR1NBQ8N0W7 255 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 WDTC1Q8N5D0 677 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 PCDH20Q8N6Y1 951 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 EHBP1Q8NDI1 1231 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 GLMNQ92990 594 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 SGF29Q96ES7 293 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 INTS2Q9H0H0 1204 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 SIK2Q9H0K1 926 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 ARHGEF38Q9NXL2 777 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 ZNF212Q9UDV6 495 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 IPO11Q9UI26 975 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 VPS9D1Q9Y2B5 631 aa10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 TLN1Q9Y490 2541 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-202ENST00000420009 AHCTF1Q8WYP5 2266 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 IGLV3-10A0A075B6K4 115 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 IGLON5A6NGN9 336 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 DRGXA6NNA5 263 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 BECN2A8MW95 431 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 D6RAR5 112 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 M0QYT0 321 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 PSMA7O14818 248 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 SUV39H1O43463 412 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 TSPAN6O43657 245 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 ENDOD1O94919 500 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 ADCY5O95622 1261 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 IGFALSP35858 605 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 CXCR3P49682 368 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 CCNHP51946 323 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 ARF5P84085 180 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 NFKB2Q00653 900 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 TGIF1Q15583 401 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 COLEC12Q5KU26 742 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 BRMS1LQ5PSV4 323 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 RETSATQ6NUM9 610 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 FOXR2Q6PJQ5 311 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 ZNF783Q6ZMS7 281 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 C11orf57Q6ZUT1 292 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 USP53Q70EK8 1073 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 TFAP2DQ7Z6R9 452 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 LURAP1LQ8IV03 231 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 ZNF397Q8NF99 534 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 OR7D4Q8NG98 312 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 EXTL1Q92935 676 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 RAB7BQ96AH8 199 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 VOPP1Q96AW1 172 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 DHTKD1Q96HY7 919 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 PPP1R13BQ96KQ4 1090 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 NPY6RQ99463 290 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 HEPHQ9BQS7 1158 aa10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 GTPBP4Q9BZE4 634 aaKnown RBP10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 SCAND2PQ9GZW5 306 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-202ENST00000420009 CLPBQ9H078 707 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms