RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 SLC25A28Q96A46 364 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 CABS1Q96KC9 395 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 NPAS1Q99742 590 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 CRACR2AQ9BSW2 395 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 MECRQ9BV79 373 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 SORBS1Q9BX66 1292 aaKnown RBP3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 MAGEH1Q9H213 219 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 TASP1Q9H6P5 420 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 PDE11AQ9HCR9 933 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 SEPSECSQ9HD40 501 aaKnown RBP3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 BATF3Q9NR55 127 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 HOMER3Q9NSC5 361 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 DECR2Q9NUI1 292 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 IRAK4Q9NWZ3 460 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 AGO2Q9UKV8 859 aaKnown RBP3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 SMC3Q9UQE7 1217 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 PTPRGP23470 1445 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 ARHGEF11O15085 1522 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 PRDM15P57071 1507 aaPredicted RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 UGGT2Q9NYU1 1516 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 TMEM247A6NEH6 219 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 RHODO00212 210 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 MSI1O43347 362 aaKnown RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 EPB41L2O43491 1005 aaKnown RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 SLC28A2O43868 658 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 CCNT1O60563 726 aaKnown RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 PEX14O75381 377 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 ERLIN1O75477 346 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 KAT7O95251 611 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 GPTP24298 496 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 HNRNPH1P31943 449 aaKnown RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 GCKP35557 465 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 ALDH7A1P49419 539 aaKnown RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 RPS6KA3P51812 740 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 SLC8A3P57103 927 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 ZXDBP98169 803 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 NUCB1Q02818 461 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 SLMAPQ14BN4 828 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 CDC37Q16543 378 aaPredicted RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 ADCK5Q3MIX3 580 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 TUBB8Q3ZCM7 444 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 SDCCAG8Q86SQ7 713 aaPredicted RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 IGFN1Q86VF2 1251 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 KLBQ86Z14 1044 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 DDIASQ8IXT1 998 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 ARL14EPQ8N8R7 260 aaPredicted RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 FSIP1Q8NA03 581 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 SPATA5Q8NB90 893 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 DRAXINQ8NBI3 349 aaPredicted RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 SPC24Q8NBT2 197 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 OR6Y1Q8NGX8 325 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 CTCFLQ8NI51 663 aaPredicted RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 MIPOL1Q8TD10 442 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 SLC2A12Q8TD20 617 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 N4BP2L2Q92802 583 aaPredicted RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 GOLGA1Q92805 767 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 GCC1Q96CN9 775 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 ZNF347Q96SE7 839 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 BAG1Q99933 345 aaPredicted RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 PIMREGQ9BSJ6 248 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 OSBPL5Q9H0X9 879 aaPredicted RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 TAF1DQ9H5J8 278 aaPredicted RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 MLXIPLQ9NP71 852 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 PDRG1Q9NUG6 133 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 MDFICQ9P1T7 246 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 ORC3Q9UBD5 711 aaPredicted RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 SLC25A13Q9UJS0 675 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 RPS6KL1Q9Y6S9 549 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 SOS1Q07889 1333 aaPredicted RBP3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 IL16Q14005 1332 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 TTC41PQ6P2S7 1318 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 PHLPP2Q6ZVD8 1323 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 KDRP35968 1356 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 LMTK3Q96Q04 1460 aa3.6□□□□□ -1.83
SDCBPP3-201ENST00000419629 LAMC1P11047 1609 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 TRBV5-3A0A0A0MS03 114 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 GOLGA6L10A6NI86 522 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 AGAP5A6NIR3 686 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 ERVV-2B6SEH9 535 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 EBAG9O00559 213 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 IRAK2O43187 625 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 TLX3O43711 291 aaPredicted RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 TCEA3O75764 348 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 KIAA0754O94854 1291 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 TFRCP02786 760 aaKnown RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 EZRP15311 586 aaKnown RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 HOXB9P17482 250 aaPredicted RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 TBXAS1P24557 533 aaPredicted RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 CST5P28325 142 aaPredicted RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 CHRNA5P30532 468 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 GRK6P43250 576 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 AARSP49588 968 aaKnown RBP eCLIP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 ZNF75DP51815 510 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 CLNS1AP54105 237 aaKnown RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 RARSP54136 660 aaKnown RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 ADPRHP54922 357 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 FAM3BP58499 235 aaPredicted RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 PPATQ06203 517 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms