RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 ADPRHP54922 357 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 RHOAP61586 193 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 SLC10A7Q0GE19 358 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 SFSWAPQ12872 951 aaKnown RBP18.93■□□□□ 0.62
PTCD3-204ENST00000418628 GSE1Q14687 1217 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 TMEFF1Q8IYR6 380 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 TEX26Q8N6G2 289 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 GRIN3AQ8TCU5 1115 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 RUBCNQ92622 972 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 RBM41Q96IZ5 413 aaKnown RBP18.93■□□□□ 0.62
PTCD3-204ENST00000418628 HDAC8Q9BY41 377 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 CPEB1Q9BZB8 566 aaKnown RBP18.93■□□□□ 0.62
PTCD3-204ENST00000418628 BTBD1Q9H0C5 482 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 NEUROG2Q9H2A3 272 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.93■□□□□ 0.62
PTCD3-204ENST00000418628 DMXL1Q9Y485 3027 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 CFAP54Q96N23 3096 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 APOL1O14791 398 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 PLRG1O43660 514 aaKnown RBP18.92■□□□□ 0.62
PTCD3-204ENST00000418628 POP4O95707 220 aaKnown RBP18.92■□□□□ 0.62
PTCD3-204ENST00000418628 SEMA4FO95754 770 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 HOXD11P31277 338 aaPredicted RBP18.92■□□□□ 0.62
PTCD3-204ENST00000418628 TAS2R38P59533 333 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 ADCY2Q08462 1091 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 CNTN1Q12860 1018 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 LBRQ14739 615 aaKnown RBP18.92■□□□□ 0.62
PTCD3-204ENST00000418628 MYLK3Q32MK0 819 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 ARSIQ5FYB1 569 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 TFDP3Q5H9I0 405 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 ZFYVE27Q5T4F4 411 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 ALG1LQ6GMV1 187 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 FAM124AQ86V42 546 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 RCOR2Q8IZ40 523 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 SYCE1Q8N0S2 351 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 HDDC3Q8N4P3 179 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 TSEN2Q8NCE0 465 aaKnown RBP18.92■□□□□ 0.62
PTCD3-204ENST00000418628 OR6K2Q8NGY2 324 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 HES6Q96HZ4 224 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 MGME1Q9BQP7 344 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 HERPUD2Q9BSE4 406 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 GPR174Q9BXC1 333 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 C6orf106Q9H6K1 298 aaPredicted RBP18.92■□□□□ 0.62
PTCD3-204ENST00000418628 ZDHHC6Q9H6R6 413 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 GMEB2Q9UKD1 530 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 SPTBN4Q9H254 2564 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 LRP4O75096 1905 aa18.92■□□□□ 0.62
PTCD3-204ENST00000418628 TSPAN11A1L157 253 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 METTL12A8MUP2 240 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 PLK4O00444 970 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 DDX3YO15523 660 aaKnown RBP18.91■□□□□ 0.62
PTCD3-204ENST00000418628 MAP3K13O43283 966 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 NRDCO43847 1150 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 RNASEH2AO75792 299 aaKnown RBP18.91■□□□□ 0.62
PTCD3-204ENST00000418628 ZRANB2O95218 330 aaKnown RBP eCLIP18.91■□□□□ 0.62
PTCD3-204ENST00000418628 MAP3K6O95382 1288 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 ZFXP17010 805 aaPredicted RBP18.91■□□□□ 0.62
PTCD3-204ENST00000418628 MX2P20592 715 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 CCNCP24863 283 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 GKP32189 559 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 HOXD12P35452 270 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 HSPA9P38646 679 aaKnown RBP18.91■□□□□ 0.62
PTCD3-204ENST00000418628 NAP1L1P55209 391 aaKnown RBP18.91■□□□□ 0.62
PTCD3-204ENST00000418628 COPS2P61201 443 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 ZNF33AQ06730 810 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 PPIDQ08752 370 aaKnown RBP18.91■□□□□ 0.62
PTCD3-204ENST00000418628 NSUN2Q08J23 767 aaKnown RBP eCLIP18.91■□□□□ 0.62
PTCD3-204ENST00000418628 LYSMD4Q5XG99 296 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 PARS2Q7L3T8 475 aaKnown RBP18.91■□□□□ 0.62
PTCD3-204ENST00000418628 PGBD5Q8N414 524 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 DNASE2BQ8WZ79 361 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 FOXJ1Q92949 421 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 EXOC2Q96KP1 924 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 NSMCE3Q96MG7 304 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 HSPA12BQ96MM6 686 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 ORAI3Q9BRQ5 295 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 CINPQ9BW66 212 aaPredicted RBP18.91■□□□□ 0.62
PTCD3-204ENST00000418628 OSBPL1AQ9BXW6 950 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 KDM4CQ9H3R0 1056 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 PARD6AQ9NPB6 346 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 SEPT3Q9UH03 358 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 EVLQ9UI08 416 aaPredicted RBP18.91■□□□□ 0.62
PTCD3-204ENST00000418628 PILRBQ9UKJ0 227 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 NCKAP1Q9Y2A7 1128 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 EFR3BQ9Y2G0 817 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 PPP2R2CQ9Y2T4 447 aa18.91■□□□□ 0.62
PTCD3-204ENST00000418628 MIF4GDA9UHW6 222 aaKnown RBP18.9■□□□□ 0.62
PTCD3-204ENST00000418628 KPNA3O00505 521 aaPredicted RBP18.9■□□□□ 0.62
PTCD3-204ENST00000418628 INSIG1O15503 277 aa18.9■□□□□ 0.62
PTCD3-204ENST00000418628 SPINT1O43278 529 aa18.9■□□□□ 0.62
PTCD3-204ENST00000418628 NDUFS2O75306 463 aa18.9■□□□□ 0.62
PTCD3-204ENST00000418628 IGHV4-34P06331 123 aa18.9■□□□□ 0.62
PTCD3-204ENST00000418628 KRT10P13645 584 aa18.9■□□□□ 0.62
PTCD3-204ENST00000418628 TGM2P21980 687 aa18.9■□□□□ 0.62
PTCD3-204ENST00000418628 MPLP40238 635 aa18.9■□□□□ 0.62
PTCD3-204ENST00000418628 DHPSP49366 369 aaPredicted RBP18.9■□□□□ 0.62
PTCD3-204ENST00000418628 DNA2P51530 1060 aa18.9■□□□□ 0.62
PTCD3-204ENST00000418628 HNRNPDQ14103 355 aaKnown RBP18.9■□□□□ 0.62
PTCD3-204ENST00000418628 DCAF12L1Q5VU92 463 aa18.9■□□□□ 0.62
PTCD3-204ENST00000418628 BBS12Q6ZW61 710 aa18.9■□□□□ 0.62
PTCD3-204ENST00000418628 PEX26Q7Z412 305 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms