RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 ZNF470Q6ECI4 717 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 MMAAQ8IVH4 418 aaKnown RBP17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 DCDC2Q9UHG0 476 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 GALTP07902 379 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 TTPAP49638 278 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 MBLAC2Q68D91 279 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 PTCRAQ6ISU1 281 aaPredicted RBP17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 HIPK4Q8NE63 616 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 RBBP8Q99708 897 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 NMRAL1Q9HBL8 299 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 MLXIPLQ9NP71 852 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 ZC4H2Q9NQZ6 224 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 FBXL12Q9NXK8 326 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 FCF1Q9Y324 198 aaKnown RBP17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 LPAL2Q16609 132 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 DNAAF5Q86Y56 855 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 MCEMP1Q8IX19 187 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 AP2M1Q96CW1 435 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 WWP1Q9H0M0 922 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 BTN3A1O00481 513 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 OXTRP30559 389 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 ALDH18A1P54886 795 aaKnown RBP17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 TXNDC8Q6A555 127 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 HNRNPABQ99729 332 aaKnown RBP17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 SCAMP1O15126 338 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 PPP2R1BP30154 601 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 ECT2LQ008S8 904 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 RUBCNQ92622 972 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 GLI3P10071 1580 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 WDR27A2RRH5 827 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 MYO1GB0I1T2 1018 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 GYPCP04921 128 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 GLRBP48167 497 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 SERPINB10P48595 397 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 PARP6Q2NL67 630 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 C16orf87Q6PH81 154 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 FAM3CQ92520 227 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 FAIM2Q9BWQ8 316 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 ARHGAP28Q9P2N2 729 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 PSME2Q9UL46 239 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 ZDHHC9Q9Y397 364 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 OR10H1Q9Y4A9 318 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 PCDHB3Q9Y5E6 796 aa17.11■□□□□ 0.33
SYNGAP1-202ENST00000418600 C4AP0C0L4 1744 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 LPOP22079 712 aaPredicted RBP17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 MGAT1P26572 445 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 ALDH4A1P30038 563 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 MAXP61244 160 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 SLC9A9Q8IVB4 645 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 SLC22A9Q8IVM8 553 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 CYP4F12Q9HCS2 524 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 ALKBH4Q9NXW9 302 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 COPG1Q9Y678 874 aaKnown RBP17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 IRAK2O43187 625 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 CILPO75339 1184 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 TRPC1P48995 793 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 TJAP1Q5JTD0 557 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 SCAIQ8N9R8 606 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 ZNF461Q8TAF7 563 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 SNRNP25Q9BV90 132 aaKnown RBP17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 DCTN4Q9UJW0 460 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 SMG5Q9UPR3 1016 aaKnown RBP17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 CALCAP01258 141 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 RHOQP17081 205 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 ZACNQ401N2 412 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 CARD16Q5EG05 197 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 RGS9BPQ6ZS82 235 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 Q8N9G6 341 aaPredicted RBP17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 SHC3Q92529 594 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 KLHL32Q96NJ5 620 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 NELL2Q99435 816 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 TTLL2Q9BWV7 592 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 AVENQ9NQS1 362 aaPredicted RBP17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 HPSEQ9Y251 543 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 VAPBO95292 243 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 SF1Q15637 639 aaKnown RBP17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 ZNF248Q8NDW4 579 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 MAFAQ8NHW3 353 aaPredicted RBP17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 LMLNQ96KR4 655 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 FZD8Q9H461 694 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 CD84Q9UIB8 345 aa17.1■□□□□ 0.33
SYNGAP1-202ENST00000418600 IGLV3-22A0A075B6J6 115 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 WDR5P61964 334 aaKnown RBP17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 TMED1Q13445 227 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 TMCO2Q7Z6W1 182 aaPredicted RBP17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 ZNF555Q8NEP9 628 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 ZFYVE19Q96K21 471 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 ADAM7Q9H2U9 754 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 ABCB6Q9NP58 842 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 A0A087X0T9 212 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 MYBPHLA2RUH7 354 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 FAM228BP0C875 321 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 MAPKAPK2P49137 400 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 CYB5D2Q8WUJ1 264 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 TUBGCP3Q96CW5 907 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 ACOT9Q9Y305 439 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 PIAS3Q9Y6X2 628 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 LEFTY2O00292 366 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 CSKP41240 450 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 CTSOP43234 321 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms