RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 GJA4P35212 333 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 ARL4CP56559 192 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 CREB5Q02930 508 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 IFFO1Q0D2I5 559 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 FAM182AQ5T1J6 154 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 NADSYN1Q6IA69 706 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 CENPUQ71F23 418 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 CPT1BQ92523 772 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 PRCCQ92733 491 aaPredicted RBP13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 EZH1Q92800 747 aaPredicted RBP13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 IGSF8Q969P0 613 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 HDAC11Q96DB2 347 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 RBM15Q96T37 977 aaKnown RBP eCLIP13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 PRMT1Q99873 361 aaKnown RBP13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 CEP41Q9BYV8 373 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 SLC39A8Q9C0K1 460 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 ETNK1Q9HBU6 452 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 SAYSD1Q9NPB0 183 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 TMEM248Q9NWD8 314 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 PLAAQ9Y263 795 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 SH3BP1Q9Y3L3 701 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 CPQQ9Y646 472 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 FAM208BQ5VWN6 2430 aa13.42□□□□□ -0.26
HLA-DMB-258ENST00000418107 TYW5A2RUC4 315 aaKnown RBP13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 C4orf47A7E2U8 309 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 GIPC1O14908 333 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 OPA1O60313 960 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 TSPAN3O60637 253 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 RHOBTB1O94844 696 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 APBB3O95704 486 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 JCHAINP01591 159 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 PROS1P07225 676 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 CCNCP24863 283 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 PAPOLAP51003 745 aaKnown RBP13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 NOVA1P51513 510 aaKnown RBP13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 IRAK1P51617 712 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 NDST2P52849 883 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 DMC1Q14565 340 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 PDGFRLQ15198 375 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 HIF1AQ16665 826 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 FBXO43Q4G163 708 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 ALFQ53S48 1182 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 SYCP2LQ5T4T6 812 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 ANKRD22Q5VYY1 191 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 ITPRIPL1Q6GPH6 555 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 TIGD7Q6NT04 549 aaPredicted RBP13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 TRMT10CQ7L0Y3 403 aaKnown RBP13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 SYT13Q7L8C5 426 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 CIR1Q86X95 450 aaPredicted RBP13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 LRRC49Q8IUZ0 686 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 ZNF683Q8IZ20 524 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 CFAP52Q8N1V2 620 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 CPA6Q8N4T0 437 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 USP33Q8TEY7 942 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 NSMCE1Q8WV22 266 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 EXOC4Q96A65 974 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 PWWP2AQ96N64 755 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 ZIM3Q96PE6 472 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 SLC22A12Q96S37 553 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 ECT2Q9H8V3 914 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 NEU3Q9UQ49 428 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 INVSQ9Y283 1065 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 ASPMQ8IZT6 3477 aa13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 NYNRINQ9P2P1 1898 aaKnown RBP13.41□□□□□ -0.26
HLA-DMB-258ENST00000418107 IGF2RP11717 2491 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 IGLV3-10A0A075B6K4 115 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 GOLGA6L10A6NI86 522 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 C1QTNF9BB2RNN3 333 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 RASA4BC9J798 803 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 RASA4O43374 803 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 RAMP2O60895 175 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 APRTP07741 180 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 C1QTNF9P0C862 333 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 PFKLP17858 780 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 PTPN3P26045 913 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 OR1E1P30953 314 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 SLC6A4P31645 630 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 MAGEA4P43358 317 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 MAPKAPK2P49137 400 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 SARNPP82979 210 aaKnown RBP13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 ZNF33AQ06730 810 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 PDIA2Q13087 525 aaKnown RBP13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 PRPSAP1Q14558 356 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 POLD3Q15054 466 aaPredicted RBP13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 ANO4Q32M45 955 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 BBS9Q3SYG4 887 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 SPDYCQ5MJ68 293 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 ADGRF1Q5T601 910 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 NLRP14Q86W24 1093 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 ARHGAP12Q8IWW6 846 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 PDIK1LQ8N165 341 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 ZNF567Q8N184 647 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 NAT8LQ8N9F0 302 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 ACDQ96AP0 544 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 AGAP3Q96P47 875 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 TSGA13Q96PP4 275 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 VAT1Q99536 393 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 TXLNGYQ9BZA5 131 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 PABPC3Q9H361 631 aaKnown RBP13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 SP110Q9HB58 689 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms