RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 BDNFP23560 247 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 PGBD2Q6P3X8 592 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 CIPCQ9C0C6 399 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 RSPH9Q9H1X1 276 aaPredicted RBP12.16□□□□□ -0.46
UBR4-205ENST00000417040 LRRC19Q9H756 370 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 ATP13A1Q9HD20 1204 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 ARL15Q9NXU5 204 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 TCRBV9S1A1TA0A576 114 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 DHRS12A0PJE2 317 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 HACD1B0YJ81 288 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 TULP2O00295 520 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 HLA-DQA2P01906 255 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 WARSP23381 471 aaKnown RBP12.16□□□□□ -0.46
UBR4-205ENST00000417040 HPCAL1P37235 193 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 MAPKAPK2P49137 400 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 XRRA1Q6P2D8 792 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 MZT2AQ6P582 158 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 DSG4Q86SJ6 1040 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 RP9Q8TA86 221 aaKnown RBP12.16□□□□□ -0.46
UBR4-205ENST00000417040 PPP1R14BQ96C90 147 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 MTMR9Q96QG7 549 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 NMUR2Q9GZQ4 415 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 CCL15-CCL14A0A0B4J2E2 113 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 IFRD1O00458 451 aaPredicted RBP12.16□□□□□ -0.46
UBR4-205ENST00000417040 MAPK9P45984 424 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 ADAM17P78536 824 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 ITGA7Q13683 1181 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 CCL15Q16663 113 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 HERC6Q8IVU3 1022 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 UBE2J2Q8N2K1 259 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 CDYL2Q8N8U2 506 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 VCPIP1Q96JH7 1222 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 LGMNQ99538 433 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 PDCD10Q9BUL8 212 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 RHBGQ9H310 441 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 ZFYVE28Q9HCC9 887 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 CRNNQ9UBG3 495 aaPredicted RBP12.16□□□□□ -0.46
UBR4-205ENST00000417040 GNEQ9Y223 722 aaKnown RBP12.16□□□□□ -0.46
UBR4-205ENST00000417040 WTIPA6NIX2 430 aaPredicted RBP12.16□□□□□ -0.46
UBR4-205ENST00000417040 CKMP06732 381 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 TFEBP19484 476 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 FASTKD3Q14CZ7 662 aaKnown RBP12.16□□□□□ -0.46
UBR4-205ENST00000417040 NDUFAF6Q330K2 333 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 FAM131AQ6UXB0 335 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 RALGPS2Q86X27 583 aaPredicted RBP12.16□□□□□ -0.46
UBR4-205ENST00000417040 RBM15BQ8NDT2 890 aaKnown RBP12.16□□□□□ -0.46
UBR4-205ENST00000417040 DGCR14Q96DF8 476 aaKnown RBP12.16□□□□□ -0.46
UBR4-205ENST00000417040 ZFYVE1Q9HBF4 777 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 TRHDEQ9UKU6 1024 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 GAS2O43903 313 aaKnown RBP12.15□□□□□ -0.46
UBR4-205ENST00000417040 GOT1P17174 413 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 SHMT1P34896 483 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 ZNF157P51786 506 aaPredicted RBP12.15□□□□□ -0.46
UBR4-205ENST00000417040 ITGA1P56199 1179 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 CDC42P60953 191 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 NAA20P61599 178 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 EVX2Q03828 476 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 ACOX1Q15067 660 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 POM121L1PQ3SYA9 428 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 SNRNP25Q9BV90 132 aaKnown RBP12.15□□□□□ -0.46
UBR4-205ENST00000417040 EPB41L4BQ9H329 900 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 RASSF1Q9NS23 344 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 PTGFRNQ9P2B2 879 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 FAM25EA8MYX2 175 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 RGS20O76081 388 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 ABL2P42684 1182 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 CYP4F8P98187 520 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 GALNT3Q14435 633 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 CRY1Q16526 586 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 HYIQ5T013 277 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 GPR156Q8NFN8 814 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 SELENOMQ8WWX9 145 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 PTCD3Q96EY7 689 aaKnown RBP12.15□□□□□ -0.46
UBR4-205ENST00000417040 LRRC4CQ9HCJ2 640 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 MCUBQ9NWR8 336 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 GALNT8Q9NY28 637 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 CDH22Q9UJ99 828 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 GSTK1Q9Y2Q3 226 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.15□□□□□ -0.46
UBR4-205ENST00000417040 FRMPD4Q14CM0 1322 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 C9JVG2 144 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 LOC110117498-PIK3R3F6TDL0 507 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 DDX3YO15523 660 aaKnown RBP12.15□□□□□ -0.46
UBR4-205ENST00000417040 TNNI3P19429 210 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 ZCCHC8Q6NZY4 707 aaKnown RBP12.15□□□□□ -0.46
UBR4-205ENST00000417040 LRRC55Q6ZSA7 311 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 KLHL23Q8NBE8 558 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 SPACA6W5XKT8 324 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 ASTN2O75129 1339 aaPredicted RBP12.15□□□□□ -0.46
UBR4-205ENST00000417040 TARBP1Q13395 1621 aaKnown RBP12.15□□□□□ -0.46
UBR4-205ENST00000417040 LRRC10BA6NIK2 292 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 ITGAVP06756 1048 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 MAPTP10636 758 aaKnown RBP12.15□□□□□ -0.46
UBR4-205ENST00000417040 INSRRP14616 1297 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 GABRB2P47870 512 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 SLC7A2P52569 658 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 MAXP61244 160 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 NAB1Q13506 487 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 ZNF549Q6P9A3 640 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 TRABD2AQ86V40 505 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms