RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 CLHC1Q8NHS4 586 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 EXOC6Q8TAG9 804 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF671Q8TAW3 534 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ACTRT2Q8TDY3 377 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 NSMCE1Q8WV22 266 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 DNAJA4Q8WW22 397 aaPredicted RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 GLMPQ8WWB7 406 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 EZH1Q92800 747 aaPredicted RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 SGK3Q96BR1 496 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PTERQ96BW5 349 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 KLHL29Q96CT2 875 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PERPQ96FX8 193 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 INTS4Q96HW7 963 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 SMC6Q96SB8 1091 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 LPIN3Q9BQK8 851 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 CACNG6Q9BXT2 260 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM129AQ9BZQ8 928 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 RTN4RQ9BZR6 473 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM192AQ9GZU8 254 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF350Q9GZX5 532 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 RAB17Q9H0T7 212 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 NELFAQ9H3P2 528 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM83DQ9H4H8 585 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PRDM12Q9H4Q4 367 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 AZI2Q9H6S1 392 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 SYNDIG1Q9H7V2 258 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ZFAND3Q9H8U3 227 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 TUFT1Q9NNX1 390 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PALMDQ9NP74 551 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC6A20Q9NP91 592 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 SEMA4BQ9NPR2 832 aaPredicted RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 GPR108Q9NPR9 543 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 TBC1D13Q9NVG8 400 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 DNAJC17Q9NVM6 304 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM120CQ9NX05 1096 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 SMPD3Q9NY59 655 aaPredicted RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ERAP1Q9NZ08 941 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FRRS1LQ9P0K9 344 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ATPIF1Q9UII2 106 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 NENFQ9UMX5 172 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 OSGIN2Q9Y236 505 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 NUDCQ9Y266 331 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 EXOC6BQ9Y2D4 811 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 CBY1Q9Y3M2 126 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 TELO2Q9Y4R8 837 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ASB1Q9Y576 335 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ACEP12821 1306 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 EVC2Q86UK5 1308 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 RPTORQ8N122 1335 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 A0A087WWL8 130 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 A0A087WZY1 265 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 LOC100506127A0A0U1RQW1 187 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SERTM2A0A1B0GWG4 89 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 GOLGA8OA6NCC3 632 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 TRIM49BA6NDI0 452 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 MFSD2BA6NFX1 497 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 TEX22C9J3V5 150 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 C11orf95C9JLR9 678 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 PRR23D1E9PI22 279 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 GOLGA8NF8WBI6 632 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 J3KTA2 159 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 WRBO00258 174 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 PRRG1O14668 218 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC30A4O14863 429 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 OGTO15294 1046 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 EIF3DO15371 548 aaKnown RBP eCLIP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 TEX28O15482 410 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 MED7O43513 233 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 TLX2O43763 284 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 BNIP3LO60238 219 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF821O75541 412 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 CRCPO75575 148 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 AKAP3O75969 853 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 HEXIM1O94992 359 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 PTBP3O95758 552 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 CH25HO95992 272 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 GBAP04062 536 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SERPING1P05155 500 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 YES1P07947 543 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ABHD2P08910 425 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 PRR23D2P0DMB1 279 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ALADP13716 330 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 CD19P15391 556 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 FOSL2P15408 326 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF8P17098 575 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 SMPD1P17405 629 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 CTPS1P17812 591 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 PTPN1P18031 435 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 ITIH1P19827 911 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 NR1D1P20393 614 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 CYP2A7P20853 494 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 CHMLP26374 656 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 HOXA13P31271 388 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 OTX2P32243 289 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 BMP8BP34820 402 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 IL13P35225 146 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 HNF1BP35680 557 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 CPOXP36551 454 aa3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 TAGLN2P37802 199 aaKnown RBP3.19□□□□□ -1.9
CTDSPL-203ENST00000416688 PBX3P40426 434 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms