RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ZNF518BQ9C0D4 1074 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 TASP1Q9H6P5 420 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 NMRAL1Q9HBL8 299 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 SEPT3Q9UH03 358 aa14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 PTBP2Q9UKA9 531 aaKnown RBP14.89□□□□□ -0.03
NCKIPSD-204ENST00000416649 NCAM1P13591 858 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 HPCAL1P37235 193 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 YWHAEP62258 255 aaKnown RBP14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 OCA2Q04671 838 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 CLPPQ16740 277 aaPredicted RBP14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 AGKQ53H12 422 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 DHFR2Q86XF0 187 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 CAMK1DQ8IU85 385 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 CCDC60Q8IWA6 550 aaPredicted RBP14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 SAMD3Q8N6K7 520 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 MCUQ8NE86 351 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 GLT1D1Q96MS3 346 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 CGREF1Q99674 301 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 RNF19AQ9NV58 838 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 FBXO40Q9UH90 709 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 CNTN6Q9UQ52 1028 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 RAP2CQ9Y3L5 183 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 PAPSS1O43252 624 aaPredicted RBP14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 GRID2O43424 1007 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 TADA2AO75478 443 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 CYP2C8P10632 490 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 NUMBP49757 651 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 GBE1Q04446 702 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 PRPSAP1Q14558 356 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 OXA1LQ15070 435 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 INSCQ1MX18 579 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 STRA8Q7Z7C7 330 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 ZNF354CQ86Y25 554 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 XYLT1Q86Y38 959 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 CDCA5Q96FF9 252 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 PRDM16Q9HAZ2 1276 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 TXNRD2Q9NNW7 524 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 ARHGAP28Q9P2N2 729 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 SUCOQ9UBS9 1254 aaKnown RBP14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 EGFL7Q9UHF1 273 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 ZNF229Q9UJW7 825 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 SLC30A1Q9Y6M5 507 aa14.88□□□□□ -0.03
NCKIPSD-204ENST00000416649 KRT75O95678 551 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 MYF6P23409 242 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 CDH8P55286 799 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 TFAMQ00059 246 aaKnown RBP14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 NIPAL4Q0D2K0 466 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 OLIG2Q13516 323 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 PDK2Q15119 407 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 ANO4Q32M45 955 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 FAM117BQ6P1L5 589 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 ABRAXAS1Q6UWZ7 409 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 KIAA2013Q8IYS2 634 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 PCDH19Q8TAB3 1148 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 CGRRF1Q99675 332 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 DOK1Q99704 481 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 RAD21L1Q9H4I0 556 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 NANOGQ9H9S0 305 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 SEPT10Q9P0V9 454 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 ERVK-11Q9UQG0 969 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 SPO11Q9Y5K1 396 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 CCDC78A2IDD5 438 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 FAM155AB1AL88 458 aaPredicted RBP14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 EIF3FO00303 357 aaPredicted RBP14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 POLR2IP36954 125 aaKnown RBP14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 GP5P40197 560 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 SLC7A2P52569 658 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 TNK2Q07912 1038 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 GALNT2Q10471 571 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 CA9Q16790 459 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 Q3C1V9 767 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 CLIP4Q8N3C7 705 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 CNTD1Q8N815 330 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 TERB1Q8NA31 727 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 RXFP2Q8WXD0 754 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 NOL6Q9H6R4 1146 aaKnown RBP14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 JPH1Q9HDC5 661 aaPredicted RBP14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 GTSE1Q9NYZ3 720 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 OAZ3Q9UMX2 235 aa14.87□□□□□ -0.03
NCKIPSD-204ENST00000416649 CCDC162PA2VCL2 907 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 MT-ND1P03886 318 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 KRT19P08727 400 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 TNFSF9P41273 254 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 MAGEA3P43357 314 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 KIZQ2M2Z5 673 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 OR6B2Q6IFH4 312 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 PDZD8Q8NEN9 1154 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 ABHD11Q8NFV4 315 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 UBA3Q8TBC4 463 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 MAGEE2Q8TD90 523 aaPredicted RBP14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 AGAP2Q99490 1192 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 NIF3L1Q9GZT8 377 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 UNC93B1Q9H1C4 597 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 SYBUQ9NX95 663 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 PKD2L2Q9NZM6 624 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 PCDHA10Q9Y5I2 948 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 RBBP6Q7Z6E9 1792 aaKnown RBP14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 TMEM114B3SHH9 223 aa14.86□□□□□ -0.03
NCKIPSD-204ENST00000416649 CLDN25C9JDP6 229 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms