RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 PCDHAC1Q9H158 963 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 CDT1Q9H211 546 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 SYNDIG1Q9H7V2 258 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 CHRAC1Q9NRG0 131 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 POLG2Q9UHN1 485 aa13.04□□□□□ -0.32
SCN1B-202ENST00000415950 A0A1B0GW55 424 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 IQCA1LA6NCM1 817 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 CCL22O00626 93 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 CYP7B1O75881 506 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 DUX4L2P0CJ85 424 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 DUX4L3P0CJ86 424 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 DUX4L4P0CJ87 422 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 DUX4L5P0CJ88 424 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 DUX4L6P0CJ89 424 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 DUX4L7P0CJ90 424 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 CKMT2P17540 419 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 ADSLP30566 484 aaPredicted RBP13.03□□□□□ -0.32
SCN1B-202ENST00000415950 THPOP40225 353 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 RABGGTBP53611 331 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 OXCT1P55809 520 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 BST2Q10589 180 aaKnown RBP13.03□□□□□ -0.32
SCN1B-202ENST00000415950 STARD3Q14849 445 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 POLD3Q15054 466 aaPredicted RBP13.03□□□□□ -0.32
SCN1B-202ENST00000415950 FAM45BPQ6NSW5 357 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 OFCC1Q8IZS5 231 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 ITFG1Q8TB96 612 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 DUX4Q9UBX2 424 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 TUBGCP4Q9UGJ1 667 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 MYO18AQ92614 2054 aaKnown RBP13.03□□□□□ -0.32
SCN1B-202ENST00000415950 CCDC154A6NI56 674 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 LIN7AO14910 233 aaPredicted RBP13.03□□□□□ -0.32
SCN1B-202ENST00000415950 CDH15P55291 814 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 CNTN1Q12860 1018 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 DDR2Q16832 855 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 PDZK1Q5T2W1 519 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 ZNF57Q68EA5 555 aaPredicted RBP13.03□□□□□ -0.32
SCN1B-202ENST00000415950 TREML1Q86YW5 311 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 EID3Q8N140 333 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 ARL10Q8N8L6 244 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 NAT16Q8N8M0 369 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 LRRC39Q96DD0 335 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 TBCBQ99426 244 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 SLC25A23Q9BV35 468 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 MRPS26Q9BYN8 205 aaKnown RBP13.03□□□□□ -0.32
SCN1B-202ENST00000415950 ULBP1Q9BZM6 244 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 ABCB10Q9NRK6 738 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 PSMD13Q9UNM6 376 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 RAD54BQ9Y620 910 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 ZNF142P52746 1687 aaPredicted RBP13.03□□□□□ -0.32
SCN1B-202ENST00000415950 KCNU1A8MYU2 1149 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 RTN3O95197 1032 aaPredicted RBP13.03□□□□□ -0.32
SCN1B-202ENST00000415950 SLC2A3P11169 496 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 ERCC2P18074 760 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 GABRB2P47870 512 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 MAXP61244 160 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 ZNF460Q14592 562 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 NOMO1Q15155 1222 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 METTL7BQ6UX53 244 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 ZNF621Q6ZSS3 439 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 CARNMT1Q8N4J0 409 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 WDR36Q8NI36 951 aaKnown RBP13.03□□□□□ -0.32
SCN1B-202ENST00000415950 CYP3A43Q9HB55 503 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 SMPD4Q9NXE4 827 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 PCDHB8Q9UN66 801 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 BAZ2AQ9UIF9 1905 aaKnown RBP13.03□□□□□ -0.32
SCN1B-202ENST00000415950 BTN3A1O00481 513 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 SNPHO15079 494 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 ATP6V1G1O75348 118 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 ITGALP20701 1170 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 TALDO1P37837 337 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 PGGT1BP53609 377 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 OGDHQ02218 1023 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 NEPROQ6NW34 567 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 LDB1Q86U70 411 aaPredicted RBP13.03□□□□□ -0.32
SCN1B-202ENST00000415950 PIGZQ86VD9 579 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 PGLYRP2Q96PD5 576 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 HBEGFQ99075 208 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 LPIN3Q9BQK8 851 aa13.03□□□□□ -0.32
SCN1B-202ENST00000415950 H3BRB1 525 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 TRMUO75648 421 aaKnown RBP13.02□□□□□ -0.32
SCN1B-202ENST00000415950 METTL18O95568 372 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 MPOP05164 745 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 CHRNGP07510 517 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 RHOAP61586 193 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 OLIG2Q13516 323 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 SEMA5AQ13591 1074 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 KRR1Q13601 381 aaKnown RBP13.02□□□□□ -0.32
SCN1B-202ENST00000415950 C1DQ13901 141 aaKnown RBP13.02□□□□□ -0.32
SCN1B-202ENST00000415950 FGD3Q5JSP0 725 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 PPM1LQ5SGD2 360 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 ELMSAN1Q6PJG2 1045 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 ARCQ7LC44 396 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 SLC22A9Q8IVM8 553 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 IGDCC3Q8IVU1 814 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 SLC7A6OSQ96CW6 309 aaPredicted RBP13.02□□□□□ -0.32
SCN1B-202ENST00000415950 TSEN34Q9BSV6 310 aaKnown RBP13.02□□□□□ -0.32
SCN1B-202ENST00000415950 ABCG8Q9H221 673 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 TUT1Q9H6E5 874 aaKnown RBP13.02□□□□□ -0.32
SCN1B-202ENST00000415950 TRIM39Q9HCM9 518 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 RSL24D1Q9UHA3 163 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms