RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 KLKB1P03952 638 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 HOXB9P17482 250 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 PSMA3P25788 255 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 CCKBRP32239 447 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 STAT1P42224 750 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 PIK3CAP42336 1068 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 FAM3BP58499 235 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 CHAF1AQ13111 956 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 SYCP1Q15431 976 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 TUBB8Q3ZCM7 444 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 GGT6Q6P531 493 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 ZNF549Q6P9A3 640 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 RTL10Q7L3V2 364 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 CCDC117Q8IWD4 279 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 TCP11L2Q8N4U5 519 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 TMEM199Q8N511 208 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 NKAPQ8N5F7 415 aaKnown RBP3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 ZNF713Q8N859 430 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 ENDOVQ8N8Q3 282 aaKnown RBP3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 LPAR1Q92633 364 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 TRIM63Q969Q1 353 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 ADAD1Q96M93 576 aaKnown RBP3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 ZNF830Q96NB3 372 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 CCDC94Q9BW85 323 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 SORBS1Q9BX66 1292 aaKnown RBP3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 XPO4Q9C0E2 1151 aaKnown RBP3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 AAMDCQ9H7C9 122 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 SMYD2Q9NRG4 433 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 PCDHA10Q9Y5I2 948 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 DDX49Q9Y6V7 483 aaKnown RBP3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 DEPDC5O75140 1603 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 ERVK-7P63135 1459 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 TET3O43151 1660 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 SHPRHQ149N8 1683 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 PLCH2O75038 1416 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 MAP3K4Q9Y6R4 1608 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 GTPBP10A4D1E9 387 aaKnown RBP3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 MDM4O15151 490 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 MSI1O43347 362 aaKnown RBP3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 SMAD6O43541 496 aaKnown RBP3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 TNFRSF6BO95407 300 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 BAG4O95429 457 aaKnown RBP3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 PEPDP12955 493 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 HOXB2P14652 356 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 CHRNA5P30532 468 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 SLC16A2P36021 539 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 KCNJ4P48050 445 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 PCP4P48539 62 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 RASSF2P50749 326 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 RCAN1P53805 252 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 P2RX3P56373 397 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 RIPK4P57078 832 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 NANOS2P60321 138 aaKnown RBP3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 AP2B1P63010 937 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 ROR1Q01973 937 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 ICA1Q05084 483 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 GAD2Q05329 585 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 DMTNQ08495 405 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 GALNT1Q10472 559 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 PMPCAQ10713 525 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 GALNT3Q14435 633 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 SEMA3AQ14563 771 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 KRT72Q14CN4 511 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 PLK5Q496M5 336 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 HSP90AB3PQ58FF7 597 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 Q5PR19 223 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 NUGGCQ68CJ6 796 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 MZT2BQ6NZ67 158 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 RAB11FIP2Q7L804 512 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 KDELC2Q7Z4H8 507 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 TMEM200AQ86VY9 491 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 CHD1LQ86WJ1 897 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 KLBQ86Z14 1044 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 SLC44A2Q8IWA5 706 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 PDCL2Q8N4E4 241 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 IL17REQ8NFR9 667 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 CLEC4CQ8WTT0 213 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 SH3KBP1Q96B97 665 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 HVCN1Q96D96 273 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 SCLT1Q96NL6 688 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 BRD8Q9H0E9 1235 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 PABPC3Q9H361 631 aaKnown RBP3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 PRDM8Q9NQV8 689 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 RNF146Q9NTX7 359 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 DAPP1Q9UN19 280 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 C19orf53Q9UNZ5 99 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 KAT6BQ8WYB5 2073 aa3.97□□□□□ -1.77
HMGB3P23-201ENST00000414981 LMTK2Q8IWU2 1503 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 SYCP2Q9BX26 1530 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 J3KRW8 73 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 ACTL6BO94805 426 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 HLA-DQA2P01906 255 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 GYS1P13807 737 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 PDIA3P30101 505 aaKnown RBP3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 CDC25AP30304 524 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 UBA7P41226 1012 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 CDKN2AP42771 156 aaKnown RBP3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZNF131P52739 623 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZNF132P52740 706 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 OAZ1P54368 228 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms