RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 NR3C1P04150 777 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 INHAP05111 366 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 ACTN1P12814 892 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 SLC9A1P19634 815 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 EPHB2P29323 1055 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 ARL2P36404 184 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 HSPA7P48741 367 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 NCKAP1LP55160 1127 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 STARD6P59095 220 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 CYP4F8P98187 520 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 FOXO1Q12778 655 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 CETN1Q12798 172 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 GRIK4Q16099 956 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 BMT2Q1RMZ1 405 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 RBM20Q5T481 1227 aaKnown RBP9.55□□□□□ -0.88
SNHG3-201ENST00000413987 KLC3Q6P597 504 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 SLC39A4Q6P5W5 647 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 CCDC105Q8IYK2 499 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 MIER2Q8N344 545 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 PRELID2Q8N945 189 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 RNF149Q8NC42 400 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 GRIN3AQ8TCU5 1115 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 ZNF398Q8TD17 642 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 CATSPER2Q96P56 530 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 SPXQ9BT56 116 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 FAM49AQ9H0Q0 323 aaPredicted RBP9.55□□□□□ -0.88
SNHG3-201ENST00000413987 AP5M1Q9H0R1 490 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 CDC42EP4Q9H3Q1 356 aaKnown RBP9.55□□□□□ -0.88
SNHG3-201ENST00000413987 COPS7BQ9H9Q2 264 aaPredicted RBP9.55□□□□□ -0.88
SNHG3-201ENST00000413987 AGPAT3Q9NRZ7 376 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 USP36Q9P275 1121 aaKnown RBP9.55□□□□□ -0.88
SNHG3-201ENST00000413987 CIDEBQ9UHD4 219 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 TEKT2Q9UIF3 430 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 TMEM5Q9Y2B1 443 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 SLC27A5Q9Y2P5 690 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 MED16Q9Y2X0 877 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.55□□□□□ -0.88
SNHG3-201ENST00000413987 A0A1B0GVG6 124 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 HBP1O60381 514 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 CCDC22O60826 627 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 KCNJ13O60928 360 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 CDH16O75309 829 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 ALDH1A2O94788 518 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 TTC4O95801 387 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 MLYCDO95822 493 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 LRG1P02750 347 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 IQCF3P0C7M6 154 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 SMIM10L2AP0DMW4 78 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 SMIM10L2BP0DMW5 78 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 MYBL1P10243 752 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 MAPTP10636 758 aaKnown RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 PABPC1P11940 636 aaKnown RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 VAV1P15498 845 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 ITIH2P19823 946 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 COILP38432 576 aaPredicted RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 SLC18A1P54219 525 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 SCAND1P57086 179 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 TUBA1BP68363 451 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 CDR2Q01850 454 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 LAMTOR4Q0VGL1 99 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 CBX3Q13185 183 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 TLR1Q15399 786 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 AARDQ4LEZ3 155 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 DAB2IPQ5VWQ8 1189 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 C11orf63Q6NUN7 778 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 LRRC74BQ6ZQY2 392 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 TUBA1AQ71U36 451 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 ADAT2Q7Z6V5 191 aaKnown RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 ZC3H18Q86VM9 953 aaKnown RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 CCDC25Q86WR0 208 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 TCF12Q99081 682 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 UBE2OQ9C0C9 1292 aaKnown RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 SYNCQ9H7C4 482 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 MINDY3Q9H8M7 445 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 DDX43Q9NXZ2 648 aaKnown RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 TBX20Q9UMR3 447 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 CASP8AP2Q9UKL3 1982 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 TRIP12Q14669 1992 aaPredicted RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 POM121BA6NF01 834 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 FAM47DPA6NHR8 397 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 H0YAE9 185 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 TRIM38O00635 465 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 EIF3DO15371 548 aaKnown RBP eCLIP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 SEPT4O43236 478 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 ENTPD5O75356 428 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 THP07101 528 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 LTA4HP09960 611 aaKnown RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 TMIGD3P0DMS9 266 aaPredicted RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 T-ENOLP0DO92 83 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 HOXD8P13378 290 aaPredicted RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 ADSSP30520 456 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 ABCG1P45844 678 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 AP3M2P53677 418 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 C1QTNF8P60827 252 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 GTF2BQ00403 316 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 GRSF1Q12849 480 aaKnown RBP eCLIP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 MAP4K2Q12851 820 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 SLC2A7Q6PXP3 512 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 CEP128Q6ZU80 1094 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 ZNF438Q7Z4V0 828 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms