RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 ELOVL6Q9H5J4 265 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 TMEM134Q9H6X4 195 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 CDH22Q9UJ99 828 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 SHPRHQ149N8 1683 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 SPATA31C2B4DYI2 1134 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 PGK1P00558 417 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ZNF806P0C7X5 589 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 SEPHS1P49903 392 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 NME5P56597 212 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 C1QBPQ07021 282 aaKnown RBP8.6□□□□□ -1.03
PBRM1-209ENST00000412587 USP10Q14694 798 aaKnown RBP8.6□□□□□ -1.03
PBRM1-209ENST00000412587 KCNJ8Q15842 424 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 CLEC16AQ2KHT3 1053 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 SHROOM1Q2M3G4 852 aaPredicted RBP8.6□□□□□ -1.03
PBRM1-209ENST00000412587 PDZK1Q5T2W1 519 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 C11orf63Q6NUN7 778 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 DNAJC14Q6Y2X3 702 aaPredicted RBP8.6□□□□□ -1.03
PBRM1-209ENST00000412587 KYAT3Q6YP21 454 aaKnown RBP8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ADGRG6Q86SQ4 1221 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ITIH5Q86UX2 942 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ALYREFQ86V81 257 aaKnown RBP8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ILKAPQ9H0C8 392 aaPredicted RBP8.6□□□□□ -1.03
PBRM1-209ENST00000412587 GBA3Q9H227 469 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 OSGEPQ9NPF4 335 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 DNAJC11Q9NVH1 559 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 UCKL1Q9NWZ5 548 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 MLXQ9UH92 298 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 SLC7A8Q9UHI5 535 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 RAPGEFL1Q9UHV5 662 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 TSPAN16Q9UKR8 245 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 PCDHB12Q9Y5F1 795 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ZNF263O14978 683 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 GLRA3O75311 464 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 PMPCBO75439 489 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ANXA9O76027 345 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 CLPXO76031 633 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 RECQL4O94761 1208 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 TFE3P19532 575 aaPredicted RBP8.6□□□□□ -1.03
PBRM1-209ENST00000412587 FGFR3P22607 806 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 GLRA2P23416 452 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 F8A1P23610 371 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 DNAJB2P25686 324 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 RHAGQ02094 409 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 KCNA1Q09470 495 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 EFEMP1Q12805 493 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 BTG3Q14201 252 aaPredicted RBP8.6□□□□□ -1.03
PBRM1-209ENST00000412587 QPRTQ15274 297 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 SFT2D3Q587I9 215 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 TREML2Q5T2D2 321 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 PAGE2Q7Z2X7 111 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 MARVELD2Q8N4S9 558 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 MCFD2Q8NI22 146 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ASB12Q8WXK4 309 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ZNF669Q96BR6 464 aaPredicted RBP8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ZHX1-C8orf76Q96EF9 292 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 TSPAN17Q96FV3 270 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ZNF486Q96H40 463 aaPredicted RBP8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ADAM2Q99965 735 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 PDCD10Q9BUL8 212 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 GPR63Q9BZJ6 419 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 RSPH9Q9H1X1 276 aaPredicted RBP8.6□□□□□ -1.03
PBRM1-209ENST00000412587 GPATCH2LQ9NWQ4 482 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 PLCL2Q9UPR0 1127 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 TPRKBQ9Y3C4 175 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 SPO11Q9Y5K1 396 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 KNDC1Q76NI1 1749 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 SLC12A8A0AV02 714 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ANKRD34BA5PLL1 514 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ICMTO60725 284 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 MAP3K6O95382 1288 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 RALBP11234 206 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 IFI30P13284 250 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 SPRP35270 261 aaPredicted RBP8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ETV3P41162 512 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 FUT2Q10981 343 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 GTF2H3Q13889 308 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 TFDP3Q5H9I0 405 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 DENND5BQ6ZUT9 1274 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 RASGEF1CQ8N431 466 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 PIK3R3Q92569 461 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 SGF29Q96ES7 293 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 TCF12Q99081 682 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 GAD1Q99259 594 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 APBA2Q99767 749 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 USE1Q9NZ43 259 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 EHD3Q9NZN3 535 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 SLC13A4Q9UKG4 626 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 ANKRD26Q9UPS8 1709 aa8.6□□□□□ -1.03
PBRM1-209ENST00000412587 PRR5-ARHGAP8B1AHC4 643 aa8.59□□□□□ -1.03
PBRM1-209ENST00000412587 SULT1B1O43704 296 aa8.59□□□□□ -1.03
PBRM1-209ENST00000412587 TOMM70O94826 608 aa8.59□□□□□ -1.03
PBRM1-209ENST00000412587 HLA-DPA1P20036 260 aa8.59□□□□□ -1.03
PBRM1-209ENST00000412587 HADHAP40939 763 aa8.59□□□□□ -1.03
PBRM1-209ENST00000412587 EPHB3P54753 998 aa8.59□□□□□ -1.03
PBRM1-209ENST00000412587 CDH8P55286 799 aa8.59□□□□□ -1.03
PBRM1-209ENST00000412587 ABCE1P61221 599 aaKnown RBP8.59□□□□□ -1.03
PBRM1-209ENST00000412587 ARHGAP8P85298 464 aa8.59□□□□□ -1.03
PBRM1-209ENST00000412587 PRKCQQ04759 706 aa8.59□□□□□ -1.03
PBRM1-209ENST00000412587 PTK6Q13882 451 aa8.59□□□□□ -1.03
PBRM1-209ENST00000412587 COBLL1Q53SF7 1204 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms