RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 SYNPOQ8N3V7 929 aa20.51■□□□□ 0.87
PTPA-208ENST00000411917 NAT8LQ8N9F0 302 aa20.51■□□□□ 0.87
PTPA-208ENST00000411917 CPT1BQ92523 772 aa20.51■□□□□ 0.87
PTPA-208ENST00000411917 LRIG1Q96JA1 1093 aa20.51■□□□□ 0.87
PTPA-208ENST00000411917 GDAP1L1Q96MZ0 367 aa20.51■□□□□ 0.87
PTPA-208ENST00000411917 RHOXF2Q9BQY4 288 aa20.51■□□□□ 0.87
PTPA-208ENST00000411917 CPEB1Q9BZB8 566 aaKnown RBP20.51■□□□□ 0.87
PTPA-208ENST00000411917 LRRC40Q9H9A6 602 aa20.51■□□□□ 0.87
PTPA-208ENST00000411917 ETNK1Q9HBU6 452 aa20.51■□□□□ 0.87
PTPA-208ENST00000411917 EPB41L5Q9HCM4 733 aa20.51■□□□□ 0.87
PTPA-208ENST00000411917 ARIH1Q9Y4X5 557 aaPredicted RBP20.51■□□□□ 0.87
PTPA-208ENST00000411917 MUC22E2RYF6 1773 aaPredicted RBP20.51■□□□□ 0.87
PTPA-208ENST00000411917 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.5■□□□□ 0.87
PTPA-208ENST00000411917 SHISA7A6NL88 538 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 MUSKO15146 869 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 ALOX15BO15296 676 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 INSIG1O15503 277 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 NARSO43776 548 aaKnown RBP20.5■□□□□ 0.87
PTPA-208ENST00000411917 SERPINF2P08697 491 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 MLNP12872 115 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 KIR2DL1P43626 348 aaPredicted RBP20.5■□□□□ 0.87
PTPA-208ENST00000411917 SOX9P48436 509 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 SLC7A5Q01650 507 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 TRIP13Q15645 432 aaPredicted RBP20.5■□□□□ 0.87
PTPA-208ENST00000411917 DLG2Q15700 870 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 IZUMO3Q5VZ72 239 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 TXNDC11Q6PKC3 985 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 CEP128Q6ZU80 1094 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 TTC8Q8TAM2 541 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 SHDQ96IW2 340 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 GORASP1Q9BQQ3 440 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 UNC80Q8N2C7 3258 aa20.5■□□□□ 0.87
PTPA-208ENST00000411917 A0A1W2PQ67 120 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 K7EQS6 105 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 SMAD6O43541 496 aaKnown RBP20.49■□□□□ 0.87
PTPA-208ENST00000411917 SOCS5O75159 536 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 MMP2P08253 660 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 CA4P22748 312 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 MRPS21P82921 87 aaKnown RBP20.49■□□□□ 0.87
PTPA-208ENST00000411917 SARNPP82979 210 aaKnown RBP20.49■□□□□ 0.87
PTPA-208ENST00000411917 SKOR1P84550 965 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 HNRNPA1L2Q32P51 320 aaKnown RBP20.49■□□□□ 0.87
PTPA-208ENST00000411917 CARD16Q5EG05 197 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 DGKKQ5KSL6 1271 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 NCEH1Q6PIU2 408 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 ZNF852Q6ZMS4 543 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 LINC00523Q86TU6 105 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 PRPF39Q86UA1 669 aaKnown RBP20.49■□□□□ 0.87
PTPA-208ENST00000411917 RNF135Q8IUD6 432 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 HCAR2Q8TDS4 363 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 USP33Q8TEY7 942 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 CEP41Q9BYV8 373 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 FBRSQ9HAH7 460 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 ZDHHC18Q9NUE0 388 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 SUN2Q9UH99 717 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 MRPS17Q9Y2R5 130 aaKnown RBP20.49■□□□□ 0.87
PTPA-208ENST00000411917 FCF1Q9Y324 198 aaKnown RBP20.49■□□□□ 0.87
PTPA-208ENST00000411917 SNX24Q9Y343 169 aa20.49■□□□□ 0.87
PTPA-208ENST00000411917 EDDM13A0A1B0GTR0 161 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 K7ERQ8 282 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 PPFIA2O75334 1257 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 POP4O95707 220 aaKnown RBP20.48■□□□□ 0.87
PTPA-208ENST00000411917 STK19P49842 368 aaPredicted RBP20.48■□□□□ 0.87
PTPA-208ENST00000411917 STARD6P59095 220 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 RPL26P61254 145 aaKnown RBP20.48■□□□□ 0.87
PTPA-208ENST00000411917 BASP1P80723 227 aaKnown RBP20.48■□□□□ 0.87
PTPA-208ENST00000411917 RAD51Q06609 339 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 NIPAL4Q0D2K0 466 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 CCINQ13939 588 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 ZNF234Q14588 700 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 NAIF1Q69YI7 327 aaPredicted RBP20.48■□□□□ 0.87
PTPA-208ENST00000411917 NAPEPLDQ6IQ20 393 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 FSTL4Q6MZW2 842 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 KDELC1Q6UW63 502 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 SRLQ86TD4 932 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 PRUNE1Q86TP1 453 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 FAM3CQ92520 227 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 PRCCQ92733 491 aaPredicted RBP20.48■□□□□ 0.87
PTPA-208ENST00000411917 OXNAD1Q96HP4 312 aaPredicted RBP20.48■□□□□ 0.87
PTPA-208ENST00000411917 RPL10LQ96L21 214 aaKnown RBP20.48■□□□□ 0.87
PTPA-208ENST00000411917 NELL2Q99435 816 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 GABRG3Q99928 467 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 SEMA3CQ99985 751 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 MLPHQ9BV36 600 aaPredicted RBP20.48■□□□□ 0.87
PTPA-208ENST00000411917 ARNT2Q9HBZ2 717 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 FBRSL1Q9HCM7 1045 aaKnown RBP20.48■□□□□ 0.87
PTPA-208ENST00000411917 XAB2Q9HCS7 855 aaKnown RBP20.48■□□□□ 0.87
PTPA-208ENST00000411917 SCUBE2Q9NQ36 999 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 ARHGEF3Q9NR81 526 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 SLCO3A1Q9UIG8 710 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 ANAPC5Q9UJX4 755 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 RPL26L1Q9UNX3 145 aaKnown RBP20.48■□□□□ 0.87
PTPA-208ENST00000411917 ACTL7AQ9Y615 435 aa20.48■□□□□ 0.87
PTPA-208ENST00000411917 E7EVH7 732 aa20.47■□□□□ 0.87
PTPA-208ENST00000411917 ECHS1P30084 290 aa20.47■□□□□ 0.87
PTPA-208ENST00000411917 ADRA1AP35348 466 aa20.47■□□□□ 0.87
PTPA-208ENST00000411917 VPS41P49754 854 aa20.47■□□□□ 0.87
PTPA-208ENST00000411917 ITGA8P53708 1063 aa20.47■□□□□ 0.87
PTPA-208ENST00000411917 MRPS25P82663 173 aaKnown RBP20.47■□□□□ 0.87
PTPA-208ENST00000411917 ZDHHC24Q6UX98 284 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms