RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 C1QTNF4Q9BXJ3 329 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 SPRY4Q9C004 299 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 UNC45AQ9H3U1 944 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 ABHD16BQ9H3Z7 469 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 CCDC134Q9H6E4 229 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 PANK3Q9H999 370 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 SAP30LQ9HAJ7 183 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 NOD2Q9HC29 1040 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 FBXO28Q9NVF7 368 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 GGA3Q9NZ52 723 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 DERAQ9Y315 318 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 SCN5AQ14524 2016 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 BCORL1Q5H9F3 1711 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 ARHGEF11O15085 1522 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 CLASP1Q7Z460 1538 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 ZNF608Q9ULD9 1512 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 UHRF1BP1Q6BDS2 1440 aa2.67□□□□□ -1.98
HMGB3P2-201ENST00000411913 THOC2Q8NI27 1593 aaKnown RBP2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 TCOF1Q13428 1488 aaKnown RBP2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 CCDC196A0A1B0GTZ2 297 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 MBD3L5A6NJ08 208 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 INAFM1C9JVW0 142 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 M0QZQ0 153 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 MDM4O15151 490 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 NKX2-8O15522 239 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 KRT38O76015 456 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 PPP1R3DO95685 299 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 IGLV2-11P01706 119 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 IGHDP01880 384 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 CYP3A4P08684 503 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 AKR1A1P14550 325 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 XBP1P17861 261 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 RXRAP19793 462 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 MSNP26038 577 aaKnown RBP2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 HOXD12P35452 270 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 CCR5P51681 352 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 DLX5P56178 289 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 KRTAP10-3P60369 221 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 RBM6P78332 1123 aaKnown RBP2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 CHRNDQ07001 517 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 DSC1Q08554 894 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 Q0VFX4 171 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 G3BP1Q13283 466 aaKnown RBP eCLIP2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 TRPC3Q13507 836 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 BFSP2Q13515 415 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 SLC12A1Q13621 1099 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 CBFBQ13951 182 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 DCTN1Q14203 1278 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 PGM5Q15124 567 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 ANKRD1Q15327 319 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 AAK1Q2M2I8 961 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 KLHL40Q2TBA0 621 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 HMBOX1Q6NT76 420 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 RETSATQ6NUM9 610 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 ACSM6Q6P461 480 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 ZNF449Q6P9G9 518 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 DSTYKQ6XUX3 929 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 CREB3L2Q70SY1 520 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 CREBRFQ8IUR6 639 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 DDIASQ8IXT1 998 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 MUC20Q8N307 709 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 ESX1Q8N693 406 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 PPHLN1Q8NEY8 458 aaKnown RBP2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 CEP70Q8NHQ1 597 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 SLC2A12Q8TD20 617 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 NPIPB3Q92617 1050 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 RTP4Q96DX8 246 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 FAR2Q96K12 515 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 NODALQ96S42 347 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 SEC62Q99442 399 aaKnown RBP2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 MECRQ9BV79 373 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 TSPYL1Q9H0U9 437 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 CHODLQ9H9P2 273 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 PRDM16Q9HAZ2 1276 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 PLAC1Q9HBJ0 212 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 KRCC1Q9NPI7 259 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 ABHD10Q9NUJ1 306 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 TMEM160Q9NX00 188 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 OGFRQ9NZT2 677 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 IFT80Q9P2H3 777 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 PLEKHB1Q9UF11 243 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 KCND3Q9UK17 655 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 BAG5Q9UL15 447 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 LAMP3Q9UQV4 416 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 PCDHB7Q9Y5E2 793 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 CASKIN1Q8WXD9 1431 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 YEATS2Q9ULM3 1422 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 E9PCH4 1651 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 KDM5CP41229 1560 aa2.66□□□□□ -1.98
HMGB3P2-201ENST00000411913 UHRF1BP1LA0JNW5 1464 aa2.65□□□□□ -1.98
HMGB3P2-201ENST00000411913 FYCO1Q9BQS8 1478 aa2.65□□□□□ -1.98
HMGB3P2-201ENST00000411913 KIF26BQ2KJY2 2108 aa2.65□□□□□ -1.98
HMGB3P2-201ENST00000411913 MTUS2Q5JR59 1369 aa2.65□□□□□ -1.98
HMGB3P2-201ENST00000411913 EPRSP07814 1512 aaKnown RBP2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 A0A1B0GVY2 172 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 SAC3D1A6NKF1 404 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 BECN2A8MW95 431 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 RHODO00212 210 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 PRYO14603 147 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 SLC16A5O15375 505 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms