RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 SMRP1Q8NCR6 262 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 SRFBP1Q8NEF9 429 aaKnown RBP4.79□□□□□ -1.64
CLK1-203ENST00000409769 OR1N1Q8NGS0 311 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 WIPF2Q8TF74 440 aaPredicted RBP4.79□□□□□ -1.64
CLK1-203ENST00000409769 DDX23Q9BUQ8 820 aaKnown RBP4.79□□□□□ -1.64
CLK1-203ENST00000409769 MLXIPQ9HAP2 919 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 MLXIPLQ9NP71 852 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 PRDM8Q9NQV8 689 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 DACT1Q9NYF0 836 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 AK9Q5TCS8 1911 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 AKAP11Q9UKA4 1901 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 C10orf71Q711Q0 1435 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 EMSYQ7Z589 1322 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 ANKRD18BA2A2Z9 1011 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 MBD3L5A6NJ08 208 aaPredicted RBP4.78□□□□□ -1.64
CLK1-203ENST00000409769 H3BNX3 289 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 PPP6R2O75170 966 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 ACTL6BO94805 426 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 TNFRSF6BO95407 300 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 ALPLP05186 524 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 MMP10P09238 476 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 TFEBP19484 476 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 HOXA7P31268 230 aaPredicted RBP4.78□□□□□ -1.64
CLK1-203ENST00000409769 VPS41P49754 854 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 PNLIPRP1P54315 467 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 SLC12A2P55011 1212 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 YPEL5P62699 121 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 CCDC57Q2TAC2 916 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 SLC9C1Q4G0N8 1177 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 CCDC152Q4G0S7 254 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 LRRC24Q50LG9 513 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 HSP90AB4PQ58FF6 505 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 TTC22Q5TAA0 569 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 ANKRD45Q5TZF3 282 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 NFRKBQ6P4R8 1299 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 RAB11FIP2Q7L804 512 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 ERC1Q8IUD2 1116 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 EXD3Q8N9H8 876 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 ADPRHL1Q8NDY3 354 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 OTUD7AQ8TE49 926 aaPredicted RBP4.78□□□□□ -1.64
CLK1-203ENST00000409769 KIF1BPQ96EK5 621 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 MCRS1Q96EZ8 462 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 REXO5Q96IC2 774 aaKnown RBP4.78□□□□□ -1.64
CLK1-203ENST00000409769 PUS3Q9BZE2 481 aaKnown RBP4.78□□□□□ -1.64
CLK1-203ENST00000409769 TRIM2Q9C040 744 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 PABPC3Q9H361 631 aaKnown RBP4.78□□□□□ -1.64
CLK1-203ENST00000409769 HEY2Q9UBP5 337 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 B3GNT3Q9Y2A9 372 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 RIPOR2Q9Y4F9 1068 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 SQORQ9Y6N5 450 aa4.78□□□□□ -1.64
CLK1-203ENST00000409769 SLX4Q8IY92 1834 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 C2CD4BA6NLJ0 364 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 SLC38A8A6NNN8 435 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 CRYABP02511 175 aaKnown RBP4.77□□□□□ -1.65
CLK1-203ENST00000409769 ALDOAP04075 364 aaKnown RBP4.77□□□□□ -1.65
CLK1-203ENST00000409769 RFPL3SP0C7P2 107 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 PSG1P11464 419 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 IL15P40933 162 aaPredicted RBP4.77□□□□□ -1.65
CLK1-203ENST00000409769 AP2B1P63010 937 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 SF3A3Q12874 501 aaKnown RBP eCLIP4.77□□□□□ -1.659e-7■■■□□ 15.8
CLK1-203ENST00000409769 G3BP1Q13283 466 aaKnown RBP eCLIP4.77□□□□□ -1.65
CLK1-203ENST00000409769 ERV3-1Q14264 604 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 CCDC38Q502W7 563 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 DAB2IPQ5VWQ8 1189 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 LIN54Q6MZP7 749 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 ATG16L2Q8NAA4 619 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 OR52N4Q8NGI2 321 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 ZFPM2Q8WW38 1151 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 PIGKQ92643 395 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 LRRCC1Q9C099 1032 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 SIL1Q9H173 461 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 CCDC134Q9H6E4 229 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 GPR108Q9NPR9 543 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 C19orf53Q9UNZ5 99 aaPredicted RBP4.77□□□□□ -1.65
CLK1-203ENST00000409769 ZNF609O15014 1411 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 MYH7P12883 1935 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 MYH13Q9UKX3 1938 aa4.77□□□□□ -1.65
CLK1-203ENST00000409769 MYO5AQ9Y4I1 1855 aaKnown RBP4.77□□□□□ -1.65
CLK1-203ENST00000409769 CHD4Q14839 1912 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 B4DGG1 531 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 KIF28PB7ZC32 967 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 M0QYT0 321 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 KAT7O95251 611 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 LDHAP00338 332 aaKnown RBP4.76□□□□□ -1.65
CLK1-203ENST00000409769 AKR1A1P14550 325 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 AKT1P31749 480 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 TAS2R50P59544 299 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 RPS8P62241 208 aaKnown RBP4.76□□□□□ -1.65
CLK1-203ENST00000409769 TFCP2Q12800 502 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 STIM1Q13586 685 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 GRAPQ13588 217 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 PDCD2Q16342 344 aaPredicted RBP4.76□□□□□ -1.65
CLK1-203ENST00000409769 ZNF569Q5MCW4 686 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 FAM83BQ5T0W9 1011 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 GRAPLQ8TC17 118 aaPredicted RBP4.76□□□□□ -1.65
CLK1-203ENST00000409769 SLC2A12Q8TD20 617 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 SNED1Q8TER0 1413 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 FAM234AQ9H0X4 552 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 MAGEH1Q9H213 219 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 SFXN1Q9H9B4 322 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms