RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 CNPP09543 421 aaKnown RBP4.35□□□□□ -1.71
PMS1-203ENST00000409593 CBSLP0DN79 551 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 NAGAP17050 411 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 CBSP35520 551 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 ARSFP54793 590 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 KRTAP10-9P60411 292 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 KLHL22Q53GT1 634 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 PRAMEF19Q5SWL8 479 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 CHD1LQ86WJ1 897 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 ADHFE1Q8IWW8 467 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 OR4N2Q8NGD1 307 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 PHF21BQ96EK2 531 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 SLC32A1Q9H598 525 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 ALKBH4Q9NXW9 302 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 SELENONQ9NZV5 590 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 C4orf47A7E2U8 309 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 CAPSQ13938 189 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 MYBPC2Q14324 1141 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 ASIC2Q16515 512 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 SLC18A3Q16572 532 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 ZNF324BQ6AW86 544 aaPredicted RBP4.34□□□□□ -1.71
PMS1-203ENST00000409593 NCAPH2Q6IBW4 605 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.34□□□□□ -1.71
PMS1-203ENST00000409593 TEX45Q8NA69 505 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 USP38Q8NB14 1042 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 TMEM163Q8TC26 289 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 NUDCD2Q8WVJ2 157 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 CNOT9Q92600 299 aaKnown RBP4.34□□□□□ -1.71
PMS1-203ENST00000409593 SH3KBP1Q96B97 665 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 TWNKQ96RR1 684 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 MEIS3Q99687 375 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 LMAN2LQ9H0V9 348 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 MVB12BQ9H7P6 319 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 IFT80Q9P2H3 777 aaPredicted RBP4.34□□□□□ -1.71
PMS1-203ENST00000409593 IL36RNQ9UBH0 155 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 PROCRQ9UNN8 238 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 GPR52Q9Y2T5 361 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 LRP12Q9Y561 859 aa4.34□□□□□ -1.71
PMS1-203ENST00000409593 SH2D7A6NKC9 451 aaPredicted RBP4.33□□□□□ -1.72
PMS1-203ENST00000409593 CTPS1P17812 591 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 DCTDP32321 178 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 SLC18A2Q05940 514 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 PPFIA1Q13136 1202 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 NAA25Q14CX7 972 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 PLCB4Q15147 1175 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 TDRD12Q587J7 1177 aaKnown RBP4.33□□□□□ -1.72
PMS1-203ENST00000409593 IL20RBQ6UXL0 311 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 LURAP1LQ8IV03 231 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 RBFAQ8N0V3 343 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 GPT2Q8TD30 523 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 GDPD5Q8WTR4 605 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 SCLT1Q96NL6 688 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 KRTAP1-5Q9BYS1 174 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 TM6SF1Q9BZW5 370 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 SLCO5A1Q9H2Y9 848 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 CLDN16Q9Y5I7 305 aa4.33□□□□□ -1.72
PMS1-203ENST00000409593 PER2O15055 1255 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 CEP104O60308 925 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 TSPAN3O60637 253 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 GLUD1P00367 558 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 CHRM4P08173 479 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 C21orf33P30042 268 aaPredicted RBP4.32□□□□□ -1.72
PMS1-203ENST00000409593 AMTP48728 403 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 GLUD2P49448 558 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 DSCR9P59020 149 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 TBL3Q12788 808 aaKnown RBP4.32□□□□□ -1.72
PMS1-203ENST00000409593 EFR3AQ14156 821 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 HLFQ16534 295 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 EDRF1Q3B7T1 1238 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 NADSYN1Q6IA69 706 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 C8orf82Q6P1X6 216 aaPredicted RBP4.32□□□□□ -1.72
PMS1-203ENST00000409593 FAM83HQ6ZRV2 1179 aaPredicted RBP4.32□□□□□ -1.72
PMS1-203ENST00000409593 RAB40AQ8WXH6 277 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 RNF183Q96D59 192 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 TXNDC15Q96J42 360 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 CTAGE1Q96RT6 745 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 CD180Q99467 661 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 REEP2Q9BRK0 252 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.32□□□□□ -1.72
PMS1-203ENST00000409593 EPHX3Q9H6B9 360 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 CNTNAP2Q9UHC6 1331 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 LINC01553A4QN01 128 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 CHL1O00533 1208 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 SOX30O94993 753 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 ITGB8P26012 769 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 SHBQ15464 509 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 TAF12Q16514 161 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 TYW3Q6IPR3 259 aaKnown RBP4.32□□□□□ -1.72
PMS1-203ENST00000409593 PATL1Q86TB9 770 aaKnown RBP4.32□□□□□ -1.72
PMS1-203ENST00000409593 MON1AQ86VX9 555 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 ANKRD18AQ8IVF6 992 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 TMED6Q8WW62 240 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 YME1L1Q96TA2 773 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 RIC8AQ9NPQ8 531 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 CD93Q9NPY3 652 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 TMEM51Q9NW97 253 aa4.32□□□□□ -1.72
PMS1-203ENST00000409593 IGHV4-28A0A0C4DH34 117 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 TYW5A2RUC4 315 aaKnown RBP4.31□□□□□ -1.72
PMS1-203ENST00000409593 FAM90A7PA6NKC0 464 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 FAM90A22PA8MWA6 464 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms