RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 FANCMQ8IYD8 2048 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 RIF1Q5UIP0 2472 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 RNF103O00237 685 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 AXIN1O15169 862 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 ATP9BO43861 1147 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 TMCC1O94876 653 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 ECEL1O95672 775 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 CD160O95971 181 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 MT-CO1P00395 513 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 JCHAINP01591 159 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 SRCP12931 536 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 KCNJ1P48048 391 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 STK19P49842 368 aaPredicted RBP16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 SLC10A7Q0GE19 358 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 PTPRNQ16849 979 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 ACCSLQ4AC99 568 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 EGFLAMQ63HQ2 1017 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 C4orf22Q6V702 233 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 LEKR1Q6ZMV7 388 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 B4GALNT4Q76KP1 1039 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 KLHL7Q8IXQ5 586 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 CHPFQ8IZ52 775 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 PCDH20Q8N6Y1 951 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 FAM71DQ8N9W8 422 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 SUMF1Q8NBK3 374 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 LRRN4Q8WUT4 740 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 SORCS1Q8WY21 1168 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 SLCO2A1Q92959 643 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 RTP4Q96DX8 246 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 MRGPRX3Q96LB0 322 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 PSKH2Q96QS6 385 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 EPC1Q9H2F5 836 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 POLMQ9NP87 494 aaPredicted RBP16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 RBM22Q9NW64 420 aaKnown RBP eCLIP16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 PTPRZ1P23471 2315 aaPredicted RBP16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 CFAP54Q96N23 3096 aa16.77■□□□□ 0.28
TSPAN4-208ENST00000409531 C5orf60A6NFR6 353 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 OPHN1O60890 802 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 ALDH1A2O94788 518 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 IFNB1P01574 187 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 CES1P23141 567 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 PTPN3P26045 913 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 RHOAP61586 193 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 C2orf54Q08AI8 447 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 DHX34Q14147 1143 aaKnown RBP16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 ZNF234Q14588 700 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 P3H1Q32P28 736 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 ITPRIPL1Q6GPH6 555 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 TTC27Q6P3X3 843 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 C22orf39Q6P5X5 142 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 SERPINA13PQ6UXR4 307 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 MAATS1Q7Z4T9 603 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 RASSF3Q86WH2 238 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 ACOX2Q99424 681 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 KRT12Q99456 494 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 C10orf88Q9H8K7 445 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 KLHL8Q9P2G9 620 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 SUN2Q9UH99 717 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 SLCO3A1Q9UIG8 710 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 MYO15AQ9UKN7 3530 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 CKAP5Q14008 2032 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 ANKRD36A6QL64 1941 aa16.76■□□□□ 0.27
TSPAN4-208ENST00000409531 GCATO75600 419 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 HOXB2P14652 356 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 WASP42768 502 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 RECQLP46063 649 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 SNRPD1P62314 119 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 DR1Q01658 176 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 NSUN2Q08J23 767 aaKnown RBP eCLIP16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 WASHC5Q12768 1159 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 ZBTB17Q13105 803 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 SIM2Q14190 667 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 CYTH1Q15438 398 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 DLG2Q15700 870 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 SYDE1Q6ZW31 735 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 PID1Q7Z2X4 250 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 PLPP6Q8IY26 295 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 CCHCR1Q8TD31 782 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 MYO19Q96H55 970 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 TEKT5Q96M29 485 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 SPATA13Q96N96 652 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 PPP1R2P1Q96PQ5 205 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 GABRG3Q99928 467 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 CARD6Q9BX69 1037 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 POLR1EQ9GZS1 481 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 NT5MQ9NPB1 228 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 FCF1Q9Y324 198 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 FARP1Q9Y4F1 1045 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 ACTL7AQ9Y615 435 aa16.75■□□□□ 0.27
TSPAN4-208ENST00000409531 EDDM13A0A1B0GTR0 161 aa16.74■□□□□ 0.27
TSPAN4-208ENST00000409531 WASH3PC4AMC7 463 aa16.74■□□□□ 0.27
TSPAN4-208ENST00000409531 K7ERQ8 282 aa16.74■□□□□ 0.27
TSPAN4-208ENST00000409531 SMAD6O43541 496 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-208ENST00000409531 IGSF6O95976 241 aa16.74■□□□□ 0.27
TSPAN4-208ENST00000409531 GSRP00390 522 aa16.74■□□□□ 0.27
TSPAN4-208ENST00000409531 MAPK8P45983 427 aa16.74■□□□□ 0.27
TSPAN4-208ENST00000409531 CSNK1DP48730 415 aa16.74■□□□□ 0.27
TSPAN4-208ENST00000409531 GDF10P55107 478 aa16.74■□□□□ 0.27
TSPAN4-208ENST00000409531 ITKQ08881 620 aa16.74■□□□□ 0.27
TSPAN4-208ENST00000409531 SRSF5Q13243 272 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms