RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 UMPSP11172 480 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 CTPS1P17812 591 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 EVX2Q03828 476 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 UNC5AQ6ZN44 842 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 TMEM237Q96Q45 408 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 UGT2B28Q9BY64 529 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 SLC27A6Q9Y2P4 619 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 CLUHO75153 1309 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 KELP23276 732 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 RPL14P50914 215 aaKnown RBP25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 CDK18Q07002 472 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 TAF10Q12962 218 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 ZFP28Q8NHY6 868 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 EXOC2Q96KP1 924 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 DUSP12Q9UNI6 340 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 OR6A2O95222 327 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 ZNF697Q5TEC3 545 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 FAM124AQ86V42 546 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 LIMD1Q9UGP4 676 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 ADGRA3Q8IWK6 1321 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 CLDN11O75508 207 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 ITGAVP06756 1048 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 NEK3P51956 506 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 CRADDP78560 199 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 FRG1Q14331 258 aaKnown RBP25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 FGD3Q5JSP0 725 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 SPDYCQ5MJ68 293 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 BSNDQ8WZ55 320 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 BDH2Q9BUT1 245 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 SLC25A23Q9BV35 468 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 RERGLQ9H628 205 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 AP4S1Q9Y587 144 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 SLIT3O75094 1523 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 CCNE2O96020 404 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 NUP107P57740 925 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 SLC25A52Q3SY17 297 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 KRT73Q86Y46 540 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 NACC2Q96BF6 587 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 PAGE1O75459 146 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 AADACL2Q6P093 401 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 PPP1R14AQ96A00 147 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 PIGNO95427 931 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 MAXP61244 160 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 FAM187BQ17R55 369 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 GPR141Q7Z602 305 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 BTN2A3PQ96KV6 586 aa25.3■■□□□ 1.64
SPIRE1-202ENST00000409402 FGF1P05230 155 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 GALNT3Q14435 633 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 PTPRNQ16849 979 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 GATAD2AQ86YP4 633 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 EFCAB3Q8N7B9 438 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 FERD3LQ96RJ6 166 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 GOLGA2P5Q9HBQ8 144 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 DEC1Q9P2X7 70 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 ROBO3Q96MS0 1386 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 TBC1D3DA0A087WVF3 549 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 TBC1D3IA0A087WXS9 549 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 TBC1D3EA0A087X179 549 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 TBC1D3KA0A087X1G2 549 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 TBC1D3FA6NER0 549 aaPredicted RBP25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 TBC1D3LB9A6J9 549 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 RGS5O15539 181 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 TBC1D3HP0C7X1 549 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 SNHG28P0DPA3 235 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 RPL22P35268 128 aaKnown RBP25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 COPZ1P61923 177 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 TBC1D3GQ6DHY5 549 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 TBC1D3CQ6IPX1 549 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 ZCCHC23Q6ZST2 131 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 TBC1D3Q8IZP1 549 aaPredicted RBP25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 ATXN2LQ8WWM7 1075 aaKnown RBP25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 COL26A1Q96A83 441 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 NIFKQ9BYG3 293 aaKnown RBP25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 GCATO75600 419 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 NFATC1O95644 943 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 ABCG1P45844 678 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 RGS1Q08116 209 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 PAGE2Q7Z2X7 111 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 PTGR2Q8N8N7 351 aaPredicted RBP25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 INPP4BO15327 924 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 MRPS35P82673 323 aaKnown RBP25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 ATP13A4Q4VNC1 1196 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 KLHL4Q9C0H6 718 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 EPS8L2Q9H6S3 715 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 MRC1P22897 1456 aa25.29■■□□□ 1.64
SPIRE1-202ENST00000409402 FCHO1O14526 889 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 MLYCDO95822 493 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 LHX5Q9H2C1 402 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 hCG_2014768A0A024R1R8 64 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 SCTRP47872 440 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 IL5RAQ01344 420 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 BBS12Q6ZW61 710 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 TMPRSS6Q8IU80 811 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 CCDC167Q9P0B6 97 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 AP5Z1O43299 807 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 SLC25A14O95258 325 aaPredicted RBP25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 LBPP18428 481 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 ICAM3P32942 547 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 CLK3P49761 638 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms