RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 NSMCE3Q96MG7 304 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 TM6SF2Q9BZW4 377 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 SLCO3A1Q9UIG8 710 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 ERVW-1Q9UQF0 538 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 AAR2Q9Y312 384 aaKnown RBP17.07■□□□□ 0.32
SSB-202ENST00000409333 F5P12259 2224 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 CXorf51AA0A1B0GTR3 108 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 SMAPO00193 183 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 AVILO75366 819 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 PMPCBO75439 489 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 BANF1O75531 89 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 ZNF821O75541 412 aaPredicted RBP17.07■□□□□ 0.32
SSB-202ENST00000409333 ANXA9O76027 345 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 SCNN1BP51168 640 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 SKOR1P84550 965 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 SLC20A2Q08357 652 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 MSS51Q4VC12 460 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 BEND6Q5SZJ8 279 aaPredicted RBP17.07■□□□□ 0.32
SSB-202ENST00000409333 ATXN7L2Q5T6C5 722 aaPredicted RBP17.07■□□□□ 0.32
SSB-202ENST00000409333 IPMKQ8NFU5 416 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 HNRNPLLQ8WVV9 542 aaKnown RBP17.07■□□□□ 0.32
SSB-202ENST00000409333 MRGPRX3Q96LB0 322 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 MRGPRX2Q96LB1 330 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 SERPINB12Q96P63 405 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 PIH1D1Q9NWS0 290 aaKnown RBP17.07■□□□□ 0.32
SSB-202ENST00000409333 ERI2A8K979 691 aaKnown RBP17.06■□□□□ 0.32
SSB-202ENST00000409333 SUN1O94901 812 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 HSPA9P38646 679 aaKnown RBP17.06■□□□□ 0.32
SSB-202ENST00000409333 GEMP55040 296 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 PCSK7Q16549 785 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 HIF1AQ16665 826 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 PTPRNQ16849 979 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 DGKKQ5KSL6 1271 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 KDELC1Q6UW63 502 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 CAND1Q86VP6 1230 aaKnown RBP17.06■□□□□ 0.32
SSB-202ENST00000409333 MCUQ8NE86 351 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 CAVIN3Q969G5 261 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 TADA1Q96BN2 335 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 MYO19Q96H55 970 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 APOL2Q9BQE5 337 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 TNKS2Q9H2K2 1166 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 LRRC40Q9H9A6 602 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 NOD2Q9HC29 1040 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 HAUS2Q9NVX0 235 aa17.06■□□□□ 0.32
SSB-202ENST00000409333 GOLGA6CA6NDK9 693 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 GOLGA6BA6NDN3 693 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 NARSO43776 548 aaKnown RBP17.05■□□□□ 0.32
SSB-202ENST00000409333 GOLGA6DP0CG33 693 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 EIF2DP41214 584 aaKnown RBP17.05■□□□□ 0.32
SSB-202ENST00000409333 CDK16Q00536 496 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 DHX9Q08211 1270 aaKnown RBP17.05■□□□□ 0.32
SSB-202ENST00000409333 MPP3Q13368 585 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 PUS10Q3MIT2 529 aaKnown RBP17.05■□□□□ 0.32
SSB-202ENST00000409333 C22orf39Q6P5X5 142 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 TMC3Q7Z5M5 1100 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 METTL3Q86U44 580 aaKnown RBP17.05■□□□□ 0.32
SSB-202ENST00000409333 NUDCD1Q96RS6 583 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 FBRSL1Q9HCM7 1045 aaKnown RBP17.05■□□□□ 0.32
SSB-202ENST00000409333 SCUBE2Q9NQ36 999 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 ELOVL2Q9NXB9 296 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 GOLGA6AQ9NYA3 693 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 FAM50BQ9Y247 325 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 CKAP5Q14008 2032 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 ANTXRLA6NF34 631 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.05■□□□□ 0.32
SSB-202ENST00000409333 INSIG1O15503 277 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 KAT7O95251 611 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 ATP5BP06576 529 aaKnown RBP17.05■□□□□ 0.32
SSB-202ENST00000409333 DLDP09622 509 aaKnown RBP17.05■□□□□ 0.32
SSB-202ENST00000409333 NSUN2Q08J23 767 aaKnown RBP eCLIP17.05■□□□□ 0.32
SSB-202ENST00000409333 FASTKD3Q14CZ7 662 aaKnown RBP17.05■□□□□ 0.32
SSB-202ENST00000409333 ACCSLQ4AC99 568 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 HP1BP3Q5SSJ5 553 aaPredicted RBP17.05■□□□□ 0.32
SSB-202ENST00000409333 PPP1R21Q6ZMI0 780 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 KDELC2Q7Z4H8 507 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 OR6K2Q8NGY2 324 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 PPP1R2P1Q96PQ5 205 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 FICDQ9BVA6 458 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 TXLNGYQ9BZA5 131 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 FOXP3Q9BZS1 431 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 HEBP1Q9NRV9 189 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 VPS45Q9NRW7 570 aa17.05■□□□□ 0.32
SSB-202ENST00000409333 TBC1D3BA6NDS4 549 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 SPECC1L-ADORA2AF8WAN1 911 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 PSMD3O43242 534 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 PPFIA2O75334 1257 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 AGTP01019 485 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 ASLP04424 464 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 SERPINF2P08697 491 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 ADRA1AP35348 466 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 TNNT3P45378 269 aaPredicted RBP17.04■□□□□ 0.32
SSB-202ENST00000409333 ARL4CP56559 192 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 WNT3AP56704 352 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 PDIA2Q13087 525 aaKnown RBP17.04■□□□□ 0.32
SSB-202ENST00000409333 DLG2Q15700 870 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 IER5LQ5T953 404 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 LRRC8BQ6P9F7 803 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 TXNDC11Q6PKC3 985 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 PDIK1LQ8N165 341 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 AGGF1Q8N302 714 aaeCLIP17.04■□□□□ 0.324e-19■■□□□ 12.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms