RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CRABP2P29373 138 aa17.05■□□□□ 0.32
NUP50-203ENST00000407019 NUMBP49757 651 aa17.05■□□□□ 0.32
NUP50-203ENST00000407019 ERFP50548 548 aa17.05■□□□□ 0.32
NUP50-203ENST00000407019 MRPS35P82673 323 aaKnown RBP17.05■□□□□ 0.32
NUP50-203ENST00000407019 BTKQ06187 659 aa17.05■□□□□ 0.32
NUP50-203ENST00000407019 PRKAA1Q13131 559 aa17.05■□□□□ 0.32
NUP50-203ENST00000407019 CNGA3Q16281 694 aa17.05■□□□□ 0.32
NUP50-203ENST00000407019 FAM26DQ5JW98 314 aa17.05■□□□□ 0.32
NUP50-203ENST00000407019 SEL1L3Q68CR1 1132 aa17.05■□□□□ 0.32
NUP50-203ENST00000407019 AAGABQ6PD74 315 aa17.05■□□□□ 0.32
NUP50-203ENST00000407019 RANBP10Q6VN20 620 aa17.05■□□□□ 0.32
NUP50-203ENST00000407019 FRMD7Q6ZUT3 714 aa17.05■□□□□ 0.32
NUP50-203ENST00000407019 C2CD4AQ8NCU7 369 aaPredicted RBP17.05■□□□□ 0.32
NUP50-203ENST00000407019 C1orf74Q96LT6 269 aa17.05■□□□□ 0.32
NUP50-203ENST00000407019 PRKD2Q9BZL6 878 aa17.05■□□□□ 0.32
NUP50-203ENST00000407019 XPR1Q9UBH6 696 aa17.05■□□□□ 0.32
NUP50-203ENST00000407019 TLR6Q9Y2C9 796 aa17.05■□□□□ 0.32
NUP50-203ENST00000407019 NYNRINQ9P2P1 1898 aaKnown RBP17.04■□□□□ 0.32
NUP50-203ENST00000407019 LOC100653049A0A140TA62 436 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 TARM1B6A8C7 271 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 KRT34O76011 436 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 CHRNA4P43681 627 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 CD151P48509 253 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 PSEN1P49768 467 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 EPHB1P54762 984 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 MLLT6P55198 1093 aaPredicted RBP17.04■□□□□ 0.32
NUP50-203ENST00000407019 KLC1Q07866 573 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 ASPHQ12797 758 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 ZNF460Q14592 562 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 ARL13AQ5H913 290 aaPredicted RBP17.04■□□□□ 0.32
NUP50-203ENST00000407019 PIK3R6Q5UE93 754 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 ZNF470Q6ECI4 717 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 IRGCQ6NXR0 463 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 MSANTD2Q6P1R3 559 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 PGM2L1Q6PCE3 622 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 TMC7Q7Z402 723 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 CEP97Q8IW35 865 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 MFSD6LQ8IWD5 586 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 DCP1BQ8IZD4 617 aaKnown RBP17.04■□□□□ 0.32
NUP50-203ENST00000407019 SHKBP1Q8TBC3 707 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 FAM136AQ96C01 138 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 ELMO2Q96JJ3 720 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 ZCWPW1Q9H0M4 648 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 ATXN3LQ9H3M9 355 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 CYP4F11Q9HBI6 524 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 OSER1Q9NX31 292 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 CDH22Q9UJ99 828 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 CORO1CQ9ULV4 474 aaPredicted RBP17.04■□□□□ 0.32
NUP50-203ENST00000407019 ARHGAP26Q9UNA1 814 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 SCML2Q9UQR0 700 aa17.04■□□□□ 0.32
NUP50-203ENST00000407019 EIF4E1BA6NMX2 242 aaKnown RBP17.03■□□□□ 0.32
NUP50-203ENST00000407019 SLCO1B7G3V0H7 640 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 CCR10P46092 362 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 FLT3LGP49771 235 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 NAGLUP54802 743 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 WNT3AP56704 352 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 PCSK7Q16549 785 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 TRIM71Q2Q1W2 868 aaKnown RBP17.03■□□□□ 0.32
NUP50-203ENST00000407019 GLB1LQ6UWU2 654 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 KDELC2Q7Z4H8 507 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 MON1AQ86VX9 555 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 DEFB107AQ8IZN7 70 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 KLHDC9Q8NEP7 349 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 NXNL1Q96CM4 212 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 MOCOSQ96EN8 888 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 TTC1Q99614 292 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 ZNF184Q99676 751 aaPredicted RBP17.03■□□□□ 0.32
NUP50-203ENST00000407019 RTKNQ9BST9 563 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 SLC25A51Q9H1U9 297 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 ACSS2Q9NR19 701 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 TRMT13Q9NUP7 481 aaKnown RBP17.03■□□□□ 0.32
NUP50-203ENST00000407019 VTI1BQ9UEU0 232 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 FBXO5Q9UKT4 447 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 MYO16Q9Y6X6 1858 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 A0A087X1B8 175 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 GOLGA8QA0A0J9YX86 632 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 GOLGA8OA6NCC3 632 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 GOLGA8NF8WBI6 632 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 NEMP1O14524 444 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 DLX3O60479 287 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 B4GALT3O60512 393 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 PDE5AO76074 875 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 BAG2O95816 211 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 SLC2A3P11169 496 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 KPNA2P52292 529 aaKnown RBP17.03■□□□□ 0.32
NUP50-203ENST00000407019 CACNB2Q08289 660 aaPredicted RBP17.03■□□□□ 0.32
NUP50-203ENST00000407019 PEX6Q13608 980 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 ARMC3Q5W041 872 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 KDELC1Q6UW63 502 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 ACAD11Q709F0 780 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 SAPCD2Q86UD0 394 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 NUP93Q8N1F7 819 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 STON2Q8WXE9 905 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 JADE3Q92613 823 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 SLC39A13Q96H72 371 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 GPR78Q96P69 363 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 NOL6Q9H6R4 1146 aaKnown RBP17.03■□□□□ 0.32
NUP50-203ENST00000407019 WDR55Q9H6Y2 383 aaPredicted RBP17.03■□□□□ 0.32
NUP50-203ENST00000407019 S100A14Q9HCY8 104 aa17.03■□□□□ 0.32
NUP50-203ENST00000407019 PPM1HQ9ULR3 514 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms