RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 TRHDEQ9UKU6 1024 aa33.77■■■■□ 3
CSNK1E-204ENST00000403904 A0A1W2PQF6 199 aa33.76■■■□□ 2.99
CSNK1E-204ENST00000403904 TARSL2A2RTX5 802 aaKnown RBP33.76■■■□□ 2.99
CSNK1E-204ENST00000403904 SYNCRIPO60506 623 aaKnown RBP33.76■■■□□ 2.99
CSNK1E-204ENST00000403904 IGSF6O95976 241 aa33.76■■■□□ 2.99
CSNK1E-204ENST00000403904 GSRP00390 522 aa33.76■■■□□ 2.99
CSNK1E-204ENST00000403904 COL9A1P20849 921 aa33.76■■■□□ 2.99
CSNK1E-204ENST00000403904 CD68P34810 354 aaPredicted RBP33.76■■■□□ 2.99
CSNK1E-204ENST00000403904 CHST14Q8NCH0 376 aa33.76■■■□□ 2.99
CSNK1E-204ENST00000403904 SPATA13Q96N96 652 aa33.76■■■□□ 2.99
CSNK1E-204ENST00000403904 KRT12Q99456 494 aa33.76■■■□□ 2.99
CSNK1E-204ENST00000403904 C2orf42Q9NWW7 574 aa33.76■■■□□ 2.99
CSNK1E-204ENST00000403904 EVLQ9UI08 416 aaPredicted RBP33.76■■■□□ 2.99
CSNK1E-204ENST00000403904 ATG13O75143 517 aa33.75■■■□□ 2.99
CSNK1E-204ENST00000403904 AOC1P19801 751 aa33.75■■■□□ 2.99
CSNK1E-204ENST00000403904 CCNHP51946 323 aaPredicted RBP33.75■■■□□ 2.99
CSNK1E-204ENST00000403904 LMNB2Q03252 620 aa33.75■■■□□ 2.99
CSNK1E-204ENST00000403904 STARD3Q14849 445 aa33.75■■■□□ 2.99
CSNK1E-204ENST00000403904 TMEM92Q6UXU6 159 aa33.75■■■□□ 2.99
CSNK1E-204ENST00000403904 PLPP6Q8IY26 295 aa33.75■■■□□ 2.99
CSNK1E-204ENST00000403904 STK40Q8N2I9 435 aa33.75■■■□□ 2.99
CSNK1E-204ENST00000403904 CCDC89Q8N998 374 aa33.75■■■□□ 2.99
CSNK1E-204ENST00000403904 HAUS2Q9NVX0 235 aa33.75■■■□□ 2.99
CSNK1E-204ENST00000403904 INSIG1O15503 277 aa33.74■■■□□ 2.99
CSNK1E-204ENST00000403904 GCATO75600 419 aa33.74■■■□□ 2.99
CSNK1E-204ENST00000403904 ZSCAN5DPP0CG00 497 aa33.74■■■□□ 2.99
CSNK1E-204ENST00000403904 CR2P20023 1033 aa33.74■■■□□ 2.99
CSNK1E-204ENST00000403904 GKP32189 559 aa33.74■■■□□ 2.99
CSNK1E-204ENST00000403904 DSC2Q02487 901 aa33.74■■■□□ 2.99
CSNK1E-204ENST00000403904 CAMK2GQ13555 558 aaPredicted RBP33.74■■■□□ 2.99
CSNK1E-204ENST00000403904 PBXIP1Q96AQ6 731 aa33.74■■■□□ 2.99
CSNK1E-204ENST00000403904 SEMA3CQ99985 751 aa33.74■■■□□ 2.99
CSNK1E-204ENST00000403904 GLOD4Q9HC38 313 aa33.74■■■□□ 2.99
CSNK1E-204ENST00000403904 DLGAP2Q9P1A6 1054 aa33.74■■■□□ 2.99
CSNK1E-204ENST00000403904 PCYOX1Q9UHG3 505 aa33.74■■■□□ 2.99
CSNK1E-204ENST00000403904 F5H423 210 aaPredicted RBP33.73■■■□□ 2.99
CSNK1E-204ENST00000403904 SLC34A2O95436 690 aa33.73■■■□□ 2.99
CSNK1E-204ENST00000403904 NFKB1P19838 968 aa33.73■■■□□ 2.99
CSNK1E-204ENST00000403904 CRY1Q16526 586 aa33.73■■■□□ 2.99
CSNK1E-204ENST00000403904 MYLK3Q32MK0 819 aa33.73■■■□□ 2.99
CSNK1E-204ENST00000403904 SYT13Q7L8C5 426 aa33.73■■■□□ 2.99
CSNK1E-204ENST00000403904 SRLQ86TD4 932 aa33.73■■■□□ 2.99
CSNK1E-204ENST00000403904 NUDCD1Q96RS6 583 aa33.73■■■□□ 2.99
CSNK1E-204ENST00000403904 NOD2Q9HC29 1040 aa33.73■■■□□ 2.99
CSNK1E-204ENST00000403904 SCUBE2Q9NQ36 999 aa33.73■■■□□ 2.99
CSNK1E-204ENST00000403904 FEZ2Q9UHY8 353 aaPredicted RBP33.73■■■□□ 2.99
CSNK1E-204ENST00000403904 OPHN1O60890 802 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 NIPAL4Q0D2K0 466 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 MTAPQ13126 283 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 P3H1Q32P28 736 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 ALG1LQ6GMV1 187 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 MNS1Q8NEH6 495 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 ARRDC2Q8TBH0 407 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 GRK7Q8WTQ7 553 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 NSMCE3Q96MG7 304 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 ZDHHC6Q9H6R6 413 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 L2HGDHQ9H9P8 463 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 RSPH14Q9UHP6 348 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 FARP1Q9Y4F1 1045 aaPredicted RBP33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 CSNK1DP48730 415 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 CLCN5P51795 746 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 ELAVL3Q14576 367 aaKnown RBP33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 TRIP13Q15645 432 aaPredicted RBP33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 ARHGEF18Q6ZSZ5 1173 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 FAM129BQ96TA1 746 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 CARD6Q9BX69 1037 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 CD248Q9HCU0 757 aa33.72■■■□□ 2.99
CSNK1E-204ENST00000403904 ANKRD36A6QL64 1941 aa33.71■■■□□ 2.99
CSNK1E-204ENST00000403904 ECEL1O95672 775 aa33.71■■■□□ 2.99
CSNK1E-204ENST00000403904 POP4O95707 220 aaKnown RBP33.71■■■□□ 2.99
CSNK1E-204ENST00000403904 ACTN2P35609 894 aa33.71■■■□□ 2.99
CSNK1E-204ENST00000403904 SPEM1Q8N4L4 309 aa33.71■■■□□ 2.99
CSNK1E-204ENST00000403904 TAB3Q8N5C8 712 aaPredicted RBP33.71■■■□□ 2.99
CSNK1E-204ENST00000403904 GRIN3AQ8TCU5 1115 aa33.71■■■□□ 2.99
CSNK1E-204ENST00000403904 OR8D1Q8WZ84 308 aa33.71■■■□□ 2.99
CSNK1E-204ENST00000403904 HEPHQ9BQS7 1158 aa33.71■■■□□ 2.99
CSNK1E-204ENST00000403904 SLC25A51Q9H1U9 297 aa33.71■■■□□ 2.99
CSNK1E-204ENST00000403904 CTAGE15A4D2H0 777 aa33.7■■■□□ 2.99
CSNK1E-204ENST00000403904 CTAGE8P0CG41 777 aa33.7■■■□□ 2.99
CSNK1E-204ENST00000403904 PTGIRP43119 386 aa33.7■■■□□ 2.99
CSNK1E-204ENST00000403904 IHHQ14623 411 aa33.7■■■□□ 2.99
CSNK1E-204ENST00000403904 ITPRIPL1Q6GPH6 555 aa33.7■■■□□ 2.99
CSNK1E-204ENST00000403904 CTAGE6Q86UF2 777 aa33.7■■■□□ 2.99
CSNK1E-204ENST00000403904 CTAGE4Q8IX94 777 aa33.7■■■□□ 2.99
CSNK1E-204ENST00000403904 CEP112Q8N8E3 955 aa33.7■■■□□ 2.99
CSNK1E-204ENST00000403904 VOPP1Q96AW1 172 aa33.7■■■□□ 2.99
CSNK1E-204ENST00000403904 RUNDC3BQ96NL0 473 aa33.7■■■□□ 2.99
CSNK1E-204ENST00000403904 GBA3Q9H227 469 aa33.7■■■□□ 2.99
CSNK1E-204ENST00000403904 IL36AQ9UHA7 158 aa33.7■■■□□ 2.99
CSNK1E-204ENST00000403904 GAS8O95995 478 aa33.69■■■□□ 2.98
CSNK1E-204ENST00000403904 KRT14P02533 472 aa33.69■■■□□ 2.98
CSNK1E-204ENST00000403904 CTSLP07711 333 aa33.69■■■□□ 2.98
CSNK1E-204ENST00000403904 PSMB4P28070 264 aa33.69■■■□□ 2.98
CSNK1E-204ENST00000403904 RPL22P35268 128 aaKnown RBP33.69■■■□□ 2.98
CSNK1E-204ENST00000403904 DR1Q01658 176 aa33.69■■■□□ 2.98
CSNK1E-204ENST00000403904 NCEH1Q6PIU2 408 aa33.69■■■□□ 2.98
CSNK1E-204ENST00000403904 SPATA22Q8NHS9 363 aa33.69■■■□□ 2.98
CSNK1E-204ENST00000403904 IMP4Q96G21 291 aaKnown RBP33.69■■■□□ 2.98
CSNK1E-204ENST00000403904 RBM15Q96T37 977 aaKnown RBP eCLIP33.69■■■□□ 2.982e-7■■■■■ 39.2
CSNK1E-204ENST00000403904 WASF2Q9Y6W5 498 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms