RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 WASF3Q9UPY6 502 aa17.08■□□□□ 0.32
CSNK1D-205ENST00000403276 CHD8Q9HCK8 2581 aa17.08■□□□□ 0.32
CSNK1D-205ENST00000403276 SHROOM3Q8TF72 1996 aa17.08■□□□□ 0.32
CSNK1D-205ENST00000403276 CXorf51AA0A1B0GTR3 108 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 FGF10O15520 208 aaPredicted RBP17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 DAPK3O43293 454 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 HYAL3O43820 417 aaPredicted RBP17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 GSRP00390 522 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 ADRB3P13945 408 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 TCF4P15884 667 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 ITGB7P26010 798 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 IL1R2P27930 398 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 CCT8P50990 548 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 NEK3P51956 506 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 SNRPD1P62314 119 aaKnown RBP17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 HNRNPDQ14103 355 aaKnown RBP17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 STAT4Q14765 748 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 SUZ12Q15022 739 aaKnown RBP17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 ZNF284Q2VY69 593 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 SETMARQ53H47 684 aaPredicted RBP17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 SEL1L3Q68CR1 1132 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 FBXL19Q6PCT2 694 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 VPS36Q86VN1 386 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 HORMAD1Q86X24 394 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 SPATS2Q86XZ4 545 aaKnown RBP17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 GATAD2AQ86YP4 633 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 PLPP6Q8IY26 295 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 PNPLA1Q8N8W4 532 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 IQCDQ96DY2 449 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 ELF4Q99607 663 aaPredicted RBP17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 SCNM1Q9BWG6 230 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 SLC39A8Q9C0K1 460 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 LRRC19Q9H756 370 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 DMTF1Q9Y222 760 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 PCDHGB2Q9Y5G2 931 aa17.07■□□□□ 0.32
CSNK1D-205ENST00000403276 LRRK1Q38SD2 2015 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 PTPRBP23467 1997 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 MAP1BP46821 2468 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 A0A1B0GTQ1 180 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 ZSCAN5CA6NGD5 496 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 C16orf96A6NNT2 1141 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 PRAMEF26H0Y7S4 382 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 J3KR12 359 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 INSIG1O15503 277 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 POP4O95707 220 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 UGT2B4P06133 528 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 ERCC2P18074 760 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 HTR7P34969 479 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 ZNF75DP51815 510 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 NXPH1P58417 271 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 RHOAP61586 193 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 CYTH1Q15438 398 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 SHBQ15464 509 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 SMTNL2Q2TAL5 461 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 PARP15Q460N3 678 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 SLC45A4Q5BKX6 768 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 CCDC122Q5T0U0 273 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 NEK5Q6P3R8 708 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 ALKBH5Q6P6C2 394 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 RFX8Q6ZV50 586 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 MFSD2AQ8NA29 543 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 ARHGEF26Q96DR7 871 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 KLHL32Q96NJ5 620 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 ZWILCHQ9H900 591 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 GDF3Q9NR23 364 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 CWC15Q9P013 229 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.06■□□□□ 0.326e-7■■□□□ 12.4
CSNK1D-205ENST00000403276 FADS3Q9Y5Q0 445 aa17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 ARID1BQ8NFD5 2236 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-205ENST00000403276 FLRT2O43155 660 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 PCDHGA12O60330 932 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 FTH1P19P0C7X4 201 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 NUDT1P36639 197 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 EIF4A3P38919 411 aaKnown RBP17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 ABL2P42684 1182 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 PAPOLAP51003 745 aaKnown RBP17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 NDST2P52849 883 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 BNIP3Q12983 259 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 INO80DQ53TQ3 878 aaPredicted RBP17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 ZNF805Q5CZA5 627 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 SLCO6A1Q86UG4 719 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 CHCHD4Q8N4Q1 142 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 BAHD1Q8TBE0 780 aaPredicted RBP17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 MRFAP1L1Q96HT8 127 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 EXOC2Q96KP1 924 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 GDAP1L1Q96MZ0 367 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 NUP85Q9BW27 656 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 LHX3Q9UBR4 397 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 UBA2Q9UBT2 640 aaPredicted RBP17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 GGT7Q9UJ14 662 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 MFHAS1Q9Y4C4 1052 aa17.05■□□□□ 0.32
CSNK1D-205ENST00000403276 PLXNB3Q9ULL4 1909 aa17.04■□□□□ 0.32
CSNK1D-205ENST00000403276 GOLGA8CPA6NN73 597 aa17.04■□□□□ 0.32
CSNK1D-205ENST00000403276 EIF3CLB5ME19 914 aaKnown RBP17.04■□□□□ 0.32
CSNK1D-205ENST00000403276 DFNA5O60443 496 aa17.04■□□□□ 0.32
CSNK1D-205ENST00000403276 IGSF6O95976 241 aa17.04■□□□□ 0.32
CSNK1D-205ENST00000403276 CYP1A2P05177 515 aa17.04■□□□□ 0.32
CSNK1D-205ENST00000403276 PCK1P35558 622 aa17.04■□□□□ 0.32
CSNK1D-205ENST00000403276 CLDN2P57739 230 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms