RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 SMIM10L2BP0DMW5 78 aa18.7■□□□□ 0.58
USP25-204ENST00000400183 TLX1P31314 330 aaPredicted RBP18.7■□□□□ 0.58
USP25-204ENST00000400183 AUHQ13825 339 aaKnown RBP18.7■□□□□ 0.58
USP25-204ENST00000400183 CAPSQ13938 189 aa18.7■□□□□ 0.58
USP25-204ENST00000400183 ZNF57Q68EA5 555 aaPredicted RBP18.7■□□□□ 0.58
USP25-204ENST00000400183 POLNQ7Z5Q5 900 aa18.7■□□□□ 0.58
USP25-204ENST00000400183 FAM20CQ8IXL6 584 aa18.7■□□□□ 0.58
USP25-204ENST00000400183 RNPEPQ9H4A4 650 aa18.7■□□□□ 0.58
USP25-204ENST00000400183 ATP13A3Q9H7F0 1226 aa18.7■□□□□ 0.58
USP25-204ENST00000400183 VAV3Q9UKW4 847 aa18.7■□□□□ 0.58
USP25-204ENST00000400183 SMIM22K7EJ46 135 aa18.7■□□□□ 0.58
USP25-204ENST00000400183 CSH1P0DML2 217 aa18.7■□□□□ 0.58
USP25-204ENST00000400183 CSH2P0DML3 217 aa18.7■□□□□ 0.58
USP25-204ENST00000400183 POLD2P49005 469 aa18.7■□□□□ 0.58
USP25-204ENST00000400183 TRAF3Q13114 568 aa18.7■□□□□ 0.58
USP25-204ENST00000400183 MIIPQ5JXC2 388 aa18.7■□□□□ 0.58
USP25-204ENST00000400183 FBXO30Q8TB52 745 aa18.7■□□□□ 0.58
USP25-204ENST00000400183 MORF4L1Q9UBU8 362 aa18.7■□□□□ 0.58
USP25-204ENST00000400183 TRIM43BA6NCK2 446 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 BUD23O43709 281 aaKnown RBP18.69■□□□□ 0.58
USP25-204ENST00000400183 KLRC4O43908 158 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 SNX3O60493 162 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 TSC22D2O75157 780 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 PSMG1O95456 288 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 CALCAP01258 141 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 UQCRBP14927 111 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 TFEBP19484 476 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 CRATP43155 626 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 SQLEQ14534 574 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 WDR18Q9BV38 432 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 KPNA4O00629 521 aaPredicted RBP18.69■□□□□ 0.58
USP25-204ENST00000400183 COPZ1P61923 177 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 FMO1Q01740 532 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 C8orf59Q8N0T1 100 aaPredicted RBP18.69■□□□□ 0.58
USP25-204ENST00000400183 CACTIN-AS1Q8N1I8 211 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 MOXD2PA6NHM9 499 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 CTSEP14091 401 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 INHBEP58166 350 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 C15orf52Q6ZUT6 534 aaKnown RBP18.69■□□□□ 0.58
USP25-204ENST00000400183 PIWIL4Q7Z3Z4 852 aaKnown RBP18.69■□□□□ 0.58
USP25-204ENST00000400183 COLGALT2Q8IYK4 626 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 PPP3R2Q96LZ3 170 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 LEF1Q9UJU2 399 aaPredicted RBP18.69■□□□□ 0.58
USP25-204ENST00000400183 SPATA2Q9UM82 520 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 PEX11AO75192 247 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 NTRK1P04629 796 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 BIKQ13323 160 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 ATP13A4Q4VNC1 1196 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 ARCQ7LC44 396 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 PYDC1Q8WXC3 89 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 OMDQ99983 421 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 SEMA3CQ99985 751 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 ZNF232Q9UNY5 417 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 AGLP35573 1532 aa18.69■□□□□ 0.58
USP25-204ENST00000400183 QSOX1O00391 747 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 SNRPB2P08579 225 aaKnown RBP18.68■□□□□ 0.58
USP25-204ENST00000400183 DRG2P55039 364 aaKnown RBP18.68■□□□□ 0.58
USP25-204ENST00000400183 DDR1Q08345 913 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 ZACNQ401N2 412 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 METTL3Q86U44 580 aaKnown RBP18.68■□□□□ 0.58
USP25-204ENST00000400183 PXDNQ92626 1479 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 SPACA7Q96KW9 195 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 GINS4Q9BRT9 223 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 PTCH2Q9Y6C5 1203 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 DCCP43146 1447 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 FAM237BA0A1B0GVD1 139 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 ULK1O75385 1050 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 PFKPQ01813 784 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 AADATQ8N5Z0 425 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 ZFP28Q8NHY6 868 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 ENKURQ8TC29 256 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 BAP1Q92560 729 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 REXO4Q9GZR2 422 aaKnown RBP18.68■□□□□ 0.58
USP25-204ENST00000400183 CYLDQ9NQC7 956 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.68■□□□□ 0.58
USP25-204ENST00000400183 SLC15A5A6NIM6 579 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 RPL9P32969 192 aaKnown RBP18.68■□□□□ 0.58
USP25-204ENST00000400183 ATP1A4Q13733 1029 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 NOMO2Q5JPE7 1267 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 PRELID2Q8N945 189 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 FAIM2Q9BWQ8 316 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 CLEC4MQ9H2X3 399 aaPredicted RBP18.68■□□□□ 0.58
USP25-204ENST00000400183 FZD1Q9UP38 647 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 PDE2AO00408 941 aaPredicted RBP18.68■□□□□ 0.58
USP25-204ENST00000400183 ABL2P42684 1182 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 NOMO3P69849 1222 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 GJC2Q5T442 439 aaPredicted RBP18.68■□□□□ 0.58
USP25-204ENST00000400183 MYLPFQ96A32 169 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 ASAH2Q9NR71 780 aa18.68■□□□□ 0.58
USP25-204ENST00000400183 ARIH1Q9Y4X5 557 aaPredicted RBP18.68■□□□□ 0.58
USP25-204ENST00000400183 CCDC189A1A4V9 331 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 MAPKAPK3Q16644 382 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 PTPRNQ16849 979 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 TTC23Q5W5X9 447 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 CLYBLQ8N0X4 340 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 TM6SF2Q9BZW4 377 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 BTBD7Q9P203 1132 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 RPS6KA6Q9UK32 745 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 MTF2Q9Y483 593 aaPredicted RBP18.67■□□□□ 0.58
USP25-204ENST00000400183 GRIA4P48058 902 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms