RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 HJURPQ8NCD3 748 aaPredicted RBP11.87□□□□□ -0.51
SKA3-203ENST00000400018 BPIFB1Q8TDL5 484 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 AZIN2Q96A70 460 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 CEP295NLQ96MC4 621 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 MTRF1LQ9UGC7 380 aaKnown RBP11.87□□□□□ -0.51
SKA3-203ENST00000400018 NUMA1Q14980 2115 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 WASH4PA8MWX3 477 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 ZNF197O14709 1029 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 CTPS1P17812 591 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 NDST2P52849 883 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 NRG1Q02297 640 aaPredicted RBP11.86□□□□□ -0.51
SKA3-203ENST00000400018 EML3Q32P44 896 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 CFAP58Q5T655 872 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 CES5AQ6NT32 575 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 HDXQ7Z353 690 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 ARRDC2Q8TBH0 407 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 GRIN3AQ8TCU5 1115 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 MRGPRX2Q96LB1 330 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 KLF6Q99612 283 aaPredicted RBP11.86□□□□□ -0.51
SKA3-203ENST00000400018 IL12RB2Q99665 862 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 GBA3Q9H227 469 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 C12orf65Q9H3J6 166 aaKnown RBP11.86□□□□□ -0.51
SKA3-203ENST00000400018 VPS18Q9P253 973 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 UBA2Q9UBT2 640 aaPredicted RBP11.86□□□□□ -0.51
SKA3-203ENST00000400018 TBC1D30Q9Y2I9 924 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 MIA3Q5JRA6 1907 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 OR51F1A6NGY5 319 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 TTC34A8MYJ7 566 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 HACD1B0YJ81 288 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 MAP2K7O14733 419 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 NARSO43776 548 aaKnown RBP11.86□□□□□ -0.51
SKA3-203ENST00000400018 PPFIA2O75334 1257 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 ZMPSTE24O75844 475 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 SYF2O95926 243 aaKnown RBP11.86□□□□□ -0.51
SKA3-203ENST00000400018 LAMP2P13473 410 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 DRG2P55039 364 aaKnown RBP11.86□□□□□ -0.51
SKA3-203ENST00000400018 SEC13P55735 322 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 WNT3AP56704 352 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 BIRC2Q13490 618 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 SEPT6Q14141 434 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 MORF4L2Q15014 288 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 CTC1Q2NKJ3 1217 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 PLEKHG6Q3KR16 790 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 LRIT3Q3SXY7 679 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 C6orf118Q5T5N4 469 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 EMBQ6PCB8 327 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 C3orf62Q6ZUJ4 267 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 Q6ZVU0 165 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 LDB1Q86U70 411 aaPredicted RBP11.86□□□□□ -0.51
SKA3-203ENST00000400018 ZNF276Q8N554 614 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 CHST14Q8NCH0 376 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 HNRNPLLQ8WVV9 542 aaKnown RBP11.86□□□□□ -0.51
SKA3-203ENST00000400018 CAVIN3Q969G5 261 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 FCRL3Q96P31 734 aaPredicted RBP11.86□□□□□ -0.51
SKA3-203ENST00000400018 PPANQ9NQ55 473 aaKnown RBP11.86□□□□□ -0.51
SKA3-203ENST00000400018 SMYD2Q9NRG4 433 aa11.86□□□□□ -0.51
SKA3-203ENST00000400018 HELZP42694 1942 aaKnown RBP11.85□□□□□ -0.51
SKA3-203ENST00000400018 GOLGA6BA6NDN3 693 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 ATP8B1O43520 1251 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 TULP3O75386 442 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 TNFRSF8P28908 595 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 HSPA9P38646 679 aaKnown RBP11.85□□□□□ -0.51
SKA3-203ENST00000400018 IFI35P80217 286 aaPredicted RBP11.85□□□□□ -0.51
SKA3-203ENST00000400018 ZNF844Q08AG5 666 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 SF3A3Q12874 501 aaKnown RBP eCLIP11.85□□□□□ -0.51
SKA3-203ENST00000400018 USP4Q13107 963 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 PITRM1Q5JRX3 1037 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 TXNDC11Q6PKC3 985 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 BZW1Q7L1Q6 419 aaKnown RBP11.85□□□□□ -0.51
SKA3-203ENST00000400018 DEFB123Q8N688 67 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 CELF5Q8N6W0 485 aaKnown RBP11.85□□□□□ -0.51
SKA3-203ENST00000400018 PYROXD1Q8WU10 500 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 RABEP2Q9H5N1 569 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 SUDS3Q9H7L9 328 aaPredicted RBP11.85□□□□□ -0.51
SKA3-203ENST00000400018 ZFP14Q9HCL3 533 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 BPIFA1Q9NP55 256 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 STOML2Q9UJZ1 356 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 MAFFQ9ULX9 164 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 NFS1Q9Y697 457 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 C2CD4DB7Z1M9 353 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 OPHN1O60890 802 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 ALPIP09923 528 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 IFNAR2P48551 515 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 SEMA5AQ13591 1074 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 PARP6Q2NL67 630 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 C5orf22Q49AR2 442 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 MAP9Q49MG5 647 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 MPPE1Q53F39 396 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 TTMPQ5BVD1 217 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 IQCKQ8N0W5 287 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 PAF1Q8N7H5 531 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 FBF1Q8TES7 1133 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 PPP2R3CQ969Q6 453 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 MSLNLQ96KJ4 702 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 SIGLEC10Q96LC7 697 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 CINPQ9BW66 212 aaPredicted RBP11.85□□□□□ -0.51
SKA3-203ENST00000400018 LMAN2LQ9H0V9 348 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 ABCG8Q9H221 673 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 MLXIPLQ9NP71 852 aa11.85□□□□□ -0.51
SKA3-203ENST00000400018 CDH7Q9ULB5 785 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms