RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 EPGNQ6UW88 154 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 C14orf80Q86SX3 495 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 THEM5Q8N1Q8 247 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 EFCAB3Q8N7B9 438 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 MIPOL1Q8TD10 442 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 SCYL1Q96KG9 808 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 OR52B2Q96RD2 323 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 TTC1Q99614 292 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 C1QTNF1Q9BXJ1 281 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 FAM96AQ9H5X1 160 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 OXSMQ9NWU1 459 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 GABRQQ9UN88 632 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 SLC35E2BP0CK96 405 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 MPSTP25325 297 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 GSTT1P30711 240 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 CHRNA4P43681 627 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 FCRL5Q96RD9 977 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 HAPLN3Q96S86 360 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 WDR55Q9H6Y2 383 aaPredicted RBP18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 RBM22Q9NW64 420 aaKnown RBP eCLIP18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 RUVBL2Q9Y230 463 aaKnown RBP18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 MATN3O15232 486 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 B4GALT3O60512 393 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 PDE5AO76074 875 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 ARNTP27540 789 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 CNGA3Q16281 694 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 NOMO2Q5JPE7 1267 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 ARTNQ5T4W7 220 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 FRMD7Q6ZUT3 714 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 MFSD6LQ8IWD5 586 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 IL12RB2Q99665 862 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 SPC25Q9HBM1 224 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 OSER1Q9NX31 292 aa18.59■□□□□ 0.57
CHRFAM7A-202ENST00000397827 NEMP1O14524 444 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 TNFRSF10BO14763 440 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ANPEPP15144 967 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 CYP2C18P33260 490 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 GRIA4P48058 902 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 CACNB2Q08289 660 aaPredicted RBP18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 PCSK7Q16549 785 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 CMPK2Q5EBM0 449 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 MANEALQ5VSG8 457 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 CEP97Q8IW35 865 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 KBTBD2Q8IY47 623 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 SCML4Q8N228 414 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 CCDC124Q96CT7 223 aaKnown RBP18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 YIPF2Q9BWQ6 316 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 SMOC2Q9H3U7 446 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 CATSPERBQ9H7T0 1116 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ZNF212Q9UDV6 495 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 DSEQ9UL01 958 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 PTPRDP23468 1912 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 A0A1W2PQH9 124 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ANXA9O76027 345 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 BAG2O95816 211 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 MYL4P12829 197 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 CSRP3P50461 194 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 NAGLUP54802 743 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 YWHAHQ04917 246 aaPredicted RBP18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ZNF33AQ06730 810 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 DSC3Q14574 896 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 SLC39A12Q504Y0 691 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 BRMS1LQ5PSV4 323 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 CENPLQ8N0S6 344 aaPredicted RBP18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 FSTL5Q8N475 847 aaPredicted RBP18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 SREK1Q8WXA9 508 aaKnown RBP18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 FSD1LQ9BXM9 530 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 RMI1Q9H9A7 625 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ZFYVE28Q9HCC9 887 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 TRMT13Q9NUP7 481 aaKnown RBP18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ABI2Q9NYB9 513 aaPredicted RBP18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 PPM1HQ9ULR3 514 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 HS3ST4Q9Y661 456 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 MYLKQ15746 1914 aa18.58■□□□□ 0.56
CHRFAM7A-202ENST00000397827 NLRC5Q86WI3 1866 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 TMEM114B3SHH9 223 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 AP3B1O00203 1094 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 PSMD3O43242 534 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 KCNA10Q16322 511 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 PNPLA1Q8N8W4 532 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 COL4A4P53420 1690 aaPredicted RBP18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 NYNRINQ9P2P1 1898 aaKnown RBP18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 E9PAM4 449 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ARCN1P48444 511 aaKnown RBP18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 SEPT6Q14141 434 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 MAPRE1Q15691 268 aaKnown RBP18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ARL13AQ5H913 290 aaPredicted RBP18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 IRGCQ6NXR0 463 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ZYG11AQ6WRX3 759 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 KLHDC8BQ8IXV7 354 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 PPFIBP2Q8ND30 876 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 CMTM5Q96DZ9 223 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 SUSD3Q96L08 255 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 TSNARE1Q96NA8 513 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 OMDQ99983 421 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 ILKAPQ9H0C8 392 aaPredicted RBP18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 TRPV6Q9H1D0 765 aa18.57■□□□□ 0.56
CHRFAM7A-202ENST00000397827 FGF10O15520 208 aaPredicted RBP18.56■□□□□ 0.56
CHRFAM7A-202ENST00000397827 PIGNO95427 931 aa18.56■□□□□ 0.56
CHRFAM7A-202ENST00000397827 EPHA3P29320 983 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms