RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 A6NNZ2 444 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 K7ESM1 405 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 M0QYT0 321 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 FFAR2O15552 330 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 SMAD6O43541 496 aaKnown RBP8.94□□□□□ -0.98
CAPN3-208ENST00000397204 LZTS3O60299 673 aaPredicted RBP8.94□□□□□ -0.98
CAPN3-208ENST00000397204 LILRA1O75019 489 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 CSO75390 466 aaKnown RBP8.94□□□□□ -0.98
CAPN3-208ENST00000397204 GRAP2O75791 330 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 CNTN5O94779 1100 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 MPOP05164 745 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 RHOCP08134 193 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 BMP6P22004 513 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 KRT9P35527 623 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 USP8P40818 1118 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 RECQLP46063 649 aaPredicted RBP8.94□□□□□ -0.98
CAPN3-208ENST00000397204 IRAK1P51617 712 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 TMPRSS3P57727 454 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 GABREP78334 506 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 RELBQ01201 579 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 SLC6A3Q01959 620 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 MORC3Q14149 939 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 ISXQ2M1V0 245 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 BRMS1LQ5PSV4 323 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 OR6B2Q6IFH4 312 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 KIAA1161Q6NSJ0 714 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 RETSATQ6NUM9 610 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 TREML4Q6UXN2 200 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 SLC26A9Q7LBE3 791 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 ZDHHC17Q8IUH5 632 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 DCAF4L2Q8NA75 395 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 C1orf131Q8NDD1 294 aaKnown RBP8.94□□□□□ -0.98
CAPN3-208ENST00000397204 ZNF397Q8NF99 534 aaPredicted RBP8.94□□□□□ -0.98
CAPN3-208ENST00000397204 NT5C3BQ969T7 300 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 ARRDC3Q96B67 414 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 CCDC97Q96F63 343 aaPredicted RBP8.94□□□□□ -0.98
CAPN3-208ENST00000397204 PGAP3Q96FM1 320 aaPredicted RBP8.94□□□□□ -0.98
CAPN3-208ENST00000397204 LENG8Q96PV6 779 aaPredicted RBP8.94□□□□□ -0.98
CAPN3-208ENST00000397204 PSMB7Q99436 277 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 MYOCQ99972 504 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 OSBPL2Q9H1P3 480 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 ACP6Q9NPH0 428 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 THSD1Q9NS62 852 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 DNAJC28Q9NX36 388 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 ARHGEF38Q9NXL2 777 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 IL36AQ9UHA7 158 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 IPO11Q9UI26 975 aaKnown RBP8.94□□□□□ -0.98
CAPN3-208ENST00000397204 VPS51Q9UID3 782 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 SALL4Q9UJQ4 1053 aa8.94□□□□□ -0.98
CAPN3-208ENST00000397204 ZFR2Q9UPR6 939 aaKnown RBP8.94□□□□□ -0.98
CAPN3-208ENST00000397204 LY6G6EA0A0G2JKS1 128 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 CXorf51AA0A1B0GTR3 108 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 ILVBLA1L0T0 632 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 POM121BA6NF01 834 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 BECN2A8MW95 431 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 H3BM21 787 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 J3QKU1 62 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 K7ERQ8 282 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 TERTO14746 1132 aaKnown RBP8.93□□□□□ -0.98
CAPN3-208ENST00000397204 TPP1O14773 563 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 AP1G1O43747 822 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 MAN1A2O60476 641 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 SNAP91O60641 907 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 ADCY5O95622 1261 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 PAK4O96013 591 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-208ENST00000397204 CSF2P04141 144 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 RRM1P23921 792 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 RBMS1P29558 406 aaKnown RBP8.93□□□□□ -0.98
CAPN3-208ENST00000397204 L1CAMP32004 1257 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 NEK3P51956 506 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 CLDN2P57739 230 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 BPIFB4P59827 614 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 VAC14Q08AM6 782 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 PAK1Q13153 545 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 SGCGQ13326 291 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 FZD2Q14332 565 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 ARHGAP44Q17R89 818 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 ZNF542PQ5EBM4 170 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 ARHGAP40Q5TG30 622 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 SEL1L3Q68CR1 1132 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 ZCCHC8Q6NZY4 707 aaKnown RBP8.93□□□□□ -0.98
CAPN3-208ENST00000397204 TRIM65Q6PJ69 517 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 OLFML1Q6UWY5 402 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 KYAT3Q6YP21 454 aaKnown RBP8.93□□□□□ -0.98
CAPN3-208ENST00000397204 ZNF783Q6ZMS7 281 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 GCNT7Q6ZNI0 430 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 DPY19L3Q6ZPD9 716 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 FAM183BPQ6ZVS7 135 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 ZNF683Q8IZ20 524 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 SLC22A18ASQ8N1D0 253 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 CHST14Q8NCH0 376 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 MAPK15Q8TD08 544 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 KCNE4Q8WWG9 221 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 ASB12Q8WXK4 309 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 SHC3Q92529 594 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 NAF1Q96HR8 494 aaKnown RBP8.93□□□□□ -0.98
CAPN3-208ENST00000397204 SLC46A1Q96NT5 459 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 NPY6RQ99463 290 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 HEPHQ9BQS7 1158 aa8.93□□□□□ -0.98
CAPN3-208ENST00000397204 CRACR2AQ9BSW2 395 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms