RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 KAT5Q92993 513 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 CCDC74AQ96AQ1 378 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 PPP1R13BQ96KQ4 1090 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 NT5C1BQ96P26 610 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 MED15Q96RN5 788 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 FOXP3Q9BZS1 431 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 B3GNT4Q9C0J1 378 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 EPN3Q9H201 632 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 TNKS2Q9H2K2 1166 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 LRRN3Q9H3W5 708 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 PISDQ9UG56 409 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 LOXL2Q9Y4K0 774 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 LRRK1Q38SD2 2015 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 CHD5Q8TDI0 1954 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 PRAMEF33A0A0G2JMD5 474 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 A0A1W2PQ27 194 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 A0A1W2PQ64 194 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 A0A1W2PQC6 194 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 E5RJQ4 531 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 TSPAN6O43657 245 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 PRAMEF10O60809 474 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 CNTN5O94779 1100 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 RHOCP08134 193 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 JMJD7P0C870 316 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 CD82P27701 267 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 ETV5P41161 510 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 RECQLP46063 649 aaPredicted RBP8.59□□□□□ -1.03
SCFD1-202ENST00000396629 ZFP36L1Q07352 338 aaKnown RBP8.59□□□□□ -1.03
SCFD1-202ENST00000396629 TAF5Q15542 800 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 SKIDA1Q1XH10 827 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 FOXD4L6Q3SYB3 417 aaPredicted RBP8.59□□□□□ -1.03
SCFD1-202ENST00000396629 FOXD4L5Q5VV16 416 aaPredicted RBP8.59□□□□□ -1.03
SCFD1-202ENST00000396629 FOXD4L3Q6VB84 417 aaPredicted RBP8.59□□□□□ -1.03
SCFD1-202ENST00000396629 PARS2Q7L3T8 475 aaKnown RBP8.59□□□□□ -1.03
SCFD1-202ENST00000396629 PTRH1Q86Y79 214 aaKnown RBP8.59□□□□□ -1.03
SCFD1-202ENST00000396629 SDR16C5Q8N3Y7 309 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 ARL10Q8N8L6 244 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 DCAF4L2Q8NA75 395 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 KYQ8NBH2 561 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 FOXD4L4Q8WXT5 416 aaPredicted RBP8.59□□□□□ -1.03
SCFD1-202ENST00000396629 SLC35C1Q96A29 364 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 TMEM159Q96B96 161 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 CENPTQ96BT3 561 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 SLC2A13Q96QE2 648 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 HEPHQ9BQS7 1158 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 SLC12A9Q9BXP2 914 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 SLC13A1Q9BZW2 595 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 FAM204AQ9H8W3 233 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 METTL14Q9HCE5 456 aaKnown RBP8.59□□□□□ -1.03
SCFD1-202ENST00000396629 DDIT4Q9NX09 232 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 GULP1Q9UBP9 304 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 TUBD1Q9UJT1 453 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 CNTN6Q9UQ52 1028 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 NBPF19A0A087WUL8 3843 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 FAM237AA0A1B0GTK4 181 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.58□□□□□ -1.04
SCFD1-202ENST00000396629 TOR1BO14657 336 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 F13A1P00488 732 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 RPLP0P05388 317 aaKnown RBP8.58□□□□□ -1.04
SCFD1-202ENST00000396629 GLI1P08151 1106 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 ITIH1P19827 911 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 NOS2P35228 1153 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 IGFALSP35858 605 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 CASRP41180 1078 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 ABL2P42684 1182 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 FMO5P49326 533 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 THOP1P52888 689 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 IGFBP7Q16270 282 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 C4orf17Q53FE4 359 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 FAXCQ5TGI0 409 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 LINGO4Q6UY18 593 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 MACC1Q6ZN28 852 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 SETD3Q86TU7 594 aaPredicted RBP8.58□□□□□ -1.04
SCFD1-202ENST00000396629 ZNF683Q8IZ20 524 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 DEFB106AQ8N104 65 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 PPM1KQ8N3J5 372 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 FSTL5Q8N475 847 aaPredicted RBP8.58□□□□□ -1.04
SCFD1-202ENST00000396629 OR6C4Q8NGE1 309 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 LMO3Q8TAP4 145 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 USP7Q93009 1102 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 RAB7BQ96AH8 199 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 CPEB1Q9BZB8 566 aaKnown RBP8.58□□□□□ -1.04
SCFD1-202ENST00000396629 CEP44Q9C0F1 390 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 ASNSD1Q9NWL6 643 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 FOXJ2Q9P0K8 574 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 CFAP45Q9UL16 551 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 PCDHB11Q9Y5F2 797 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 SDK2Q58EX2 2172 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 SYNJ2BP-COX16A0A087WUM0 186 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 A0A0D9SEW6 157 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 DRGXA6NNA5 263 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 C9orf172C9J069 976 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 M0QYT0 321 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 PAGE1O75459 146 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 CELA2BP08218 269 aaPredicted RBP8.58□□□□□ -1.04
SCFD1-202ENST00000396629 ZSCAN22P10073 491 aaPredicted RBP8.58□□□□□ -1.04
SCFD1-202ENST00000396629 GGCXP38435 758 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 SLC20A2Q08357 652 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 KCNAB2Q13303 367 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 ELOCQ15369 112 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms