RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 TMEM170AQ8WVE7 144 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 IGFBPL1Q8WX77 278 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 SMARCE1Q969G3 411 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 MMABQ96EY8 250 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 C1orf74Q96LT6 269 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 UROC1Q96N76 676 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 HIPK3Q9H422 1215 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 TOR3AQ9H497 397 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 CPNE5Q9HCH3 593 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 ASB6Q9NWX5 421 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 PLK2Q9NYY3 685 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 CHORDC1Q9UHD1 332 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 PCDHGB5Q9Y5G0 923 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 A0A1W2PRQ8 180 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 NPIPB11E5RHQ5 1161 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 UBE2Q2LH0YL09 131 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 SMIM22K7EJ46 135 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 SH2B2O14492 632 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 INPPL1O15357 1258 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 IL1AP01583 271 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 CYP2A6P11509 494 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 GLULP15104 373 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 GABRB1P18505 474 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 TNFRSF1AP19438 455 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 HDAC4P56524 1084 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 NIPAL4Q0D2K0 466 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 GALNT3Q14435 633 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 FGFBP1Q14512 234 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 CRYMQ14894 314 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 ASTE1Q2TB18 679 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 EDRF1Q3B7T1 1238 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 ALDH1L2Q3SY69 923 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 SPATS1Q496A3 300 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 SYTL3Q4VX76 610 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 ZNF362Q5T0B9 420 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 TMEM268Q5VZI3 342 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 PRPF39Q86UA1 669 aaKnown RBP5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 LINC00346Q8IVM7 164 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 TAGAPQ8N103 731 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 AMER2Q8N7J2 671 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 NKAIN3Q8N8D7 197 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 FAM47BQ8NA70 645 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 SARAFQ96BY9 339 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 ZNF747Q9BV97 191 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 IFT27Q9BW83 186 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 KLK15Q9H2R5 256 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 SLC6A13Q9NSD5 602 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 SUCLA2Q9P2R7 463 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 MST1RQ04912 1400 aa5.28□□□□□ -1.56
HMGB1P10-201ENST00000395823 A0A1W2PRG0 241 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 LRRC53A6NM62 1247 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 TP73O15350 636 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 HNRNPCL1O60812 293 aaKnown RBP5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 DKC1O60832 514 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 SLC2A4P14672 509 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 TACR3P29371 465 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 RYKP34925 604 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 GNAQP50148 359 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 F2RL1P55085 397 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 AIMP2Q13155 320 aaKnown RBP5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 COL28A1Q2UY09 1125 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 C1QTNF12Q5T7M4 302 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 KIAA0930Q6ICG6 404 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 TMEM154Q6P9G4 183 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 TSSK4Q6SA08 328 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 SARM1Q6SZW1 724 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 CCDC25Q86WR0 208 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 TDRPQ86YL5 185 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 KRTAP19-1Q8IUB9 90 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 CADM3Q8N126 398 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 PNLDC1Q8NA58 520 aaKnown RBP5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 CAGE1Q8TC20 777 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 RADILQ96JH8 1075 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 PIMREGQ9BSJ6 248 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 H2AFJQ9BTM1 129 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 ZNF341Q9BYN7 854 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 NUF2Q9BZD4 464 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 SMARCAD1Q9H4L7 1026 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 ACTR5Q9H9F9 607 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 MOV10Q9HCE1 1003 aaKnown RBP5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 SLC17A6Q9P2U8 582 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 HAO1Q9UJM8 370 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 ZNF711Q9Y462 761 aa5.27□□□□□ -1.57
HMGB1P10-201ENST00000395823 FNDC1Q4ZHG4 1894 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P10-201ENST00000395823 TRBV5-7A0A0A0MS05 114 aa5.26□□□□□ -1.57
HMGB1P10-201ENST00000395823 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P10-201ENST00000395823 DDTLA6NHG4 134 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P10-201ENST00000395823 EIF3CLB5ME19 914 aaKnown RBP5.26□□□□□ -1.57
HMGB1P10-201ENST00000395823 FAM157AC9JC47 383 aa5.26□□□□□ -1.57
HMGB1P10-201ENST00000395823 MASP2O00187 686 aa5.26□□□□□ -1.57
HMGB1P10-201ENST00000395823 UBE2CO00762 179 aa5.26□□□□□ -1.57
HMGB1P10-201ENST00000395823 SLC25A17O43808 307 aa5.26□□□□□ -1.57
HMGB1P10-201ENST00000395823 NFATC1O95644 943 aa5.26□□□□□ -1.57
HMGB1P10-201ENST00000395823 TFP02787 698 aa5.26□□□□□ -1.57
HMGB1P10-201ENST00000395823 PRR35P0CG20 571 aa5.26□□□□□ -1.57
HMGB1P10-201ENST00000395823 SELLP14151 372 aa5.26□□□□□ -1.57
HMGB1P10-201ENST00000395823 KLRC2P26717 231 aa5.26□□□□□ -1.57
HMGB1P10-201ENST00000395823 CHRNA5P30532 468 aa5.26□□□□□ -1.57
HMGB1P10-201ENST00000395823 CDAP32320 146 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms