RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 PCDH9Q9HC56 1237 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 ZDHHC18Q9NUE0 388 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 SMPD4Q9NXE4 827 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 CACNA2D2Q9NY47 1150 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 GRHL1Q9NZI5 618 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 MPP6Q9NZW5 540 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 ATG2AQ2TAZ0 1938 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 C5orf60A6NFR6 353 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 GCATO75600 419 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 CNTN5O94779 1100 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 CKMP06732 381 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 ETS1P14921 441 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 RBL1P28749 1068 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 ADCY8P40145 1251 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 GARSP41250 739 aaKnown RBP11.66□□□□□ -0.54
RTN1-203ENST00000395090 NDST2P52849 883 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 NTHL1P78549 312 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 PPIDQ08752 370 aaKnown RBP11.66□□□□□ -0.54
RTN1-203ENST00000395090 HYAL1Q12794 435 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 TEAD2Q15562 447 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 ARHGAP15Q53QZ3 475 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 ALFQ53S48 1182 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 CHSY1Q86X52 802 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 ARHGAP12Q8IWW6 846 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 TP53INP2Q8IXH6 220 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 EFHBQ8N7U6 833 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 AENQ8WTP8 325 aaKnown RBP11.66□□□□□ -0.54
RTN1-203ENST00000395090 GATAD2BQ8WXI9 593 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 SMG7Q92540 1137 aaKnown RBP11.66□□□□□ -0.54
RTN1-203ENST00000395090 ART4Q93070 314 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 HDAC11Q96DB2 347 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 MYEOVQ96EZ4 313 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 EAF1Q96JC9 268 aaPredicted RBP11.66□□□□□ -0.54
RTN1-203ENST00000395090 LGMNQ99538 433 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 DDX50Q9BQ39 737 aaKnown RBP11.66□□□□□ -0.54
RTN1-203ENST00000395090 ADAM7Q9H2U9 754 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 PRDM12Q9H4Q4 367 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 NOL6Q9H6R4 1146 aaKnown RBP11.66□□□□□ -0.54
RTN1-203ENST00000395090 ARGLU1Q9NWB6 273 aaPredicted RBP11.66□□□□□ -0.54
RTN1-203ENST00000395090 WHRNQ9P202 907 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 NFU1Q9UMS0 254 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 ZNF510Q9Y2H8 683 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 SNX24Q9Y343 169 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 MYO9BQ13459 2157 aa11.66□□□□□ -0.54
RTN1-203ENST00000395090 F5H5T6 163 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 PPP1R12AO14974 1030 aaPredicted RBP11.65□□□□□ -0.54
RTN1-203ENST00000395090 ERLIN1O75477 346 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 SEC31AO94979 1220 aaKnown RBP11.65□□□□□ -0.54
RTN1-203ENST00000395090 GLP2RO95838 553 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 ZSCAN5DPP0CG00 497 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 POU3F3P20264 500 aaPredicted RBP11.65□□□□□ -0.54
RTN1-203ENST00000395090 RPL22P35268 128 aaKnown RBP11.65□□□□□ -0.54
RTN1-203ENST00000395090 IRAK1P51617 712 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 TRIP13Q15645 432 aaPredicted RBP11.65□□□□□ -0.54
RTN1-203ENST00000395090 P3H1Q32P28 736 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 TCEAL5Q5H9L2 206 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 BEND6Q5SZJ8 279 aaPredicted RBP11.65□□□□□ -0.54
RTN1-203ENST00000395090 C4orf22Q6V702 233 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 B4GALNT4Q76KP1 1039 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 PRUNE1Q86TP1 453 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 LGI2Q8N0V4 545 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 C12orf76Q8N812 135 aaPredicted RBP11.65□□□□□ -0.54
RTN1-203ENST00000395090 BBOF1Q8ND07 529 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 ZSCAN18Q8TBC5 510 aaPredicted RBP11.65□□□□□ -0.54
RTN1-203ENST00000395090 GPBAR1Q8TDU6 330 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 UBASH3BQ8TF42 649 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 HTR3CQ8WXA8 447 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 SNF8Q96H20 258 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 RPRD1AQ96P16 312 aaPredicted RBP11.65□□□□□ -0.54
RTN1-203ENST00000395090 TRIM31Q9BZY9 425 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 DPH5Q9H2P9 285 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 ASIC3Q9UHC3 531 aa11.65□□□□□ -0.54
RTN1-203ENST00000395090 DOCK4Q8N1I0 1966 aa11.65□□□□□ -0.55
RTN1-203ENST00000395090 NUP205Q92621 2012 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 TMEM265A0A087WTH1 108 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 E2F8A0AVK6 867 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 LEFTY2O00292 366 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 KCNN4O15554 427 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 MTSS1O43312 755 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 IFNB1P01574 187 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 VAV1P15498 845 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 HOXB8P17481 243 aaPredicted RBP11.64□□□□□ -0.55
RTN1-203ENST00000395090 CCNCP24863 283 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 AVPR1AP37288 418 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 MAPKAPK2P49137 400 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 CDH4P55283 916 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 YBEYP58557 167 aaPredicted RBP11.64□□□□□ -0.55
RTN1-203ENST00000395090 ADAM15Q13444 863 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 MAP9Q49MG5 647 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 RABGAP1LQ5R372 815 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 EMBQ6PCB8 327 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 RFWD3Q6PCD5 774 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 IGF2-ASQ6U949 168 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 ZDHHC24Q6UX98 284 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 TMC5Q6UXY8 1006 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 CHST9Q7L1S5 443 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 GPR149Q86SP6 731 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 CPXM2Q8N436 756 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 CCDC33Q8N5R6 958 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 KIAA1958Q8N8K9 716 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms