RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 RNF39Q9H2S5 420 aa18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 Q9H521 79 aa18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 ZBTB26Q9HCK0 441 aa18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 VTI1BQ9UEU0 232 aa18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 PRSS51A0A1B0GVH4 220 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 DDHD2O94830 711 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 MYL3P08590 195 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 SMIM10L2AP0DMW4 78 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 SMIM10L2BP0DMW5 78 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 ME2P23368 584 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 GABRB3P28472 473 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 ATXN3P54252 364 aaPredicted RBP18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 GALNT2Q10471 571 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 LAMB3Q13751 1172 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 GK3PQ14409 553 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 SLC5A9Q2M3M2 681 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 SV2CQ496J9 727 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 ARMC3Q5W041 872 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 ITPRIPL1Q6GPH6 555 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 LRRC8EQ6NSJ5 796 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 SLC41A1Q8IVJ1 513 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 ADCY4Q8NFM4 1077 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 TSNARE1Q96NA8 513 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 EPAS1Q99814 870 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 PKP2Q99959 881 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 CFHR5Q9BXR6 569 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 ULBP1Q9BZM6 244 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 UBE2OQ9C0C9 1292 aaKnown RBP18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 SNX10Q9Y5X0 201 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 SLCO1B7G3V0H7 640 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 VILLO15195 856 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 DLX3O60479 287 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 PTPN1P18031 435 aaKnown RBP18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 CCND3P30281 292 aaPredicted RBP18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 RPL5P46777 297 aaKnown RBP18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 HCAR3P49019 387 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 CPT1AP50416 773 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 AIF1P55008 147 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 MAP3K7CLP57077 242 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 MYBPC1Q00872 1141 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 PDCD2Q16342 344 aaPredicted RBP18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 MFSD14CQ5VZR4 134 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 REM2Q8IYK8 340 aaPredicted RBP18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 CATSPER1Q8NEC5 780 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 KLHL32Q96NJ5 620 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 AP5M1Q9H0R1 490 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 OCEL1Q9H607 264 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 FBXW11Q9UKB1 542 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 LZTS1Q9Y250 596 aa18.59■□□□□ 0.57
PCDHA1-202ENST00000394633 YJEFN3A6XGL0 299 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 MTSS1O43312 755 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 TADA2AO75478 443 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 BCAS2O75934 225 aaPredicted RBP18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 LILRA4P59901 499 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 ART3Q13508 389 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 SLC12A1Q13621 1099 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 MFSD10Q14728 455 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 INTS6LQ5JSJ4 861 aaKnown RBP18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 KIAA0319Q5VV43 1072 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 ARHGAP22Q7Z5H3 698 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 METTL25Q8N6Q8 603 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 DGCR14Q96DF8 476 aaKnown RBP18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 CNBD2Q96M20 576 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 TEKT5Q96M29 485 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 MED10Q9BTT4 135 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 KIFC1Q9BW19 673 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 NSMCE4AQ9NXX6 385 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 XPR1Q9UBH6 696 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 BCAP29Q9UHQ4 241 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 COPG1Q9Y678 874 aaKnown RBP18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 BPTFQ12830 3046 aa18.58■□□□□ 0.57
PCDHA1-202ENST00000394633 ACOT8O14734 319 aa18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 DUSP11O75319 330 aaKnown RBP18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 CAPN15O75808 1086 aa18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 CLPTM1O96005 669 aa18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 AHSGP02765 367 aa18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 CAPNS1P04632 268 aa18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 PRKAR2AP13861 404 aaKnown RBP18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 KCNE1P15382 129 aa18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 CDH17Q12864 832 aa18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 ZNF460Q14592 562 aa18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 RFTN1Q14699 578 aaPredicted RBP18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 TSTD2Q5T7W7 516 aa18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 RBM44Q6ZP01 1051 aaKnown RBP18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 ZSCAN18Q8TBC5 510 aaPredicted RBP18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 DPF3Q92784 378 aa18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 NPAS2Q99743 824 aa18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 BRD8Q9H0E9 1235 aa18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 EFCAB1Q9HAE3 211 aa18.58■□□□□ 0.56
PCDHA1-202ENST00000394633 TCAF2A6NFQ2 919 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 TMEM233B4DJY2 109 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 JCHAINP01591 159 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 SRGAP2BP0DMP2 458 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 DARSP14868 501 aaKnown RBP18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 DAOAP59103 153 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 CDKL1Q00532 357 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 PURAQ00577 322 aaKnown RBP18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 XKR4Q5GH76 650 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 CTU1Q7Z7A3 348 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms