RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 OGFOD2Q6N063 350 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 CD300LGQ6UXG3 332 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 PID1Q7Z2X4 250 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 PATL1Q86TB9 770 aaKnown RBP15.76■□□□□ 0.11
PTBP1-204ENST00000394601 PKMYT1Q99640 499 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 GBA3Q9H227 469 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 ZNF408Q9H9D4 720 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 LRRC4Q9HBW1 653 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 INIPQ9NRY2 104 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 RRN3Q9NYV6 651 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 F8W8V4 182 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 CXCR3P49682 368 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 LIMK2P53671 638 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 DNAL1Q4LDG9 190 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 SLC7A5P1Q8MH63 180 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 PARK7Q99497 189 aaKnown RBP15.75■□□□□ 0.11
PTBP1-204ENST00000394601 COLEC11Q9BWP8 271 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 STN1Q9H668 368 aaKnown RBP15.75■□□□□ 0.11
PTBP1-204ENST00000394601 CNGB3Q9NQW8 809 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 TRNAU1APQ9NX07 287 aaKnown RBP15.75■□□□□ 0.11
PTBP1-204ENST00000394601 TIMM13Q9Y5L4 95 aaPredicted RBP15.75■□□□□ 0.11
PTBP1-204ENST00000394601 SIN3BO75182 1162 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 PAX3P23760 479 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 GARSP41250 739 aaKnown RBP15.75■□□□□ 0.11
PTBP1-204ENST00000394601 SLC5A3P53794 718 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 DMPKQ09013 629 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 MAP2K5Q13163 448 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 DLG2Q15700 870 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 C16orf87Q6PH81 154 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 XKR5Q6UX68 686 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 DNAJC14Q6Y2X3 702 aaPredicted RBP15.75■□□□□ 0.11
PTBP1-204ENST00000394601 TNS4Q8IZW8 715 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 SIX6OS1Q8N1H7 587 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 CDKL2Q92772 493 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 DNAJC28Q9NX36 388 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 VANGL2Q9ULK5 521 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 CROCCQ5TZA2 2017 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 MYADML2A6NDP7 307 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.75■□□□□ 0.11
PTBP1-204ENST00000394601 J3QRK9 145 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 FBXO21O94952 628 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 IGLV3-25P01717 112 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 ENO3P13929 434 aaPredicted RBP15.75■□□□□ 0.11
PTBP1-204ENST00000394601 EIF2B2P49770 351 aaKnown RBP15.75■□□□□ 0.11
PTBP1-204ENST00000394601 COPAP53621 1224 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 TBCCQ15814 346 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 CARTPTQ16568 116 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 KRT80Q6KB66 452 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 CNTD1Q8N815 330 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 FBXL8Q96CD0 374 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 AGAP3Q96P47 875 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 C1QTNF1Q9BXJ1 281 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 DNAI2Q9GZS0 605 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 ARHGAP26Q9UNA1 814 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 SORCS3Q9UPU3 1222 aa15.75■□□□□ 0.11
PTBP1-204ENST00000394601 APOBEC2Q9Y235 224 aaKnown RBP15.75■□□□□ 0.11
PTBP1-204ENST00000394601 ARHGAP10A1A4S6 786 aa15.74■□□□□ 0.11
PTBP1-204ENST00000394601 C17orf102A2RUQ5 167 aa15.74■□□□□ 0.11
PTBP1-204ENST00000394601 NUMBP49757 651 aa15.74■□□□□ 0.11
PTBP1-204ENST00000394601 IFRD2Q12894 506 aaPredicted RBP15.74■□□□□ 0.11
PTBP1-204ENST00000394601 CLVS1Q8IUQ0 354 aaPredicted RBP15.74■□□□□ 0.11
PTBP1-204ENST00000394601 PRICKLE1Q96MT3 831 aaPredicted RBP15.74■□□□□ 0.11
PTBP1-204ENST00000394601 CAB39LQ9H9S4 337 aa15.74■□□□□ 0.11
PTBP1-204ENST00000394601 ADAM28Q9UKQ2 775 aa15.74■□□□□ 0.11
PTBP1-204ENST00000394601 POMPQ9Y244 141 aa15.74■□□□□ 0.11
PTBP1-204ENST00000394601 GJA8P48165 433 aa15.74■□□□□ 0.11
PTBP1-204ENST00000394601 CCNIQ14094 377 aa15.74■□□□□ 0.11
PTBP1-204ENST00000394601 LRRC40Q9H9A6 602 aa15.74■□□□□ 0.11
PTBP1-204ENST00000394601 CHRAC1Q9NRG0 131 aa15.74■□□□□ 0.11
PTBP1-204ENST00000394601 CPA4Q9UI42 421 aa15.74■□□□□ 0.11
PTBP1-204ENST00000394601 CRTAMO95727 393 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 CSE1LP55060 971 aaKnown RBP15.73■□□□□ 0.11
PTBP1-204ENST00000394601 ABCE1P61221 599 aaKnown RBP15.73■□□□□ 0.11
PTBP1-204ENST00000394601 INTS6LQ5JSJ4 861 aaKnown RBP15.73■□□□□ 0.11
PTBP1-204ENST00000394601 TWF2Q6IBS0 349 aaKnown RBP15.73■□□□□ 0.11
PTBP1-204ENST00000394601 TMEM214Q6NUQ4 689 aaKnown RBP15.73■□□□□ 0.11
PTBP1-204ENST00000394601 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.73■□□□□ 0.113e-9■■■■■ 36.5
PTBP1-204ENST00000394601 NCSTNQ92542 709 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 MARK4Q96L34 752 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 SPON1Q9HCB6 807 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 KLHL8Q9P2G9 620 aaPredicted RBP15.73■□□□□ 0.11
PTBP1-204ENST00000394601 FIS1Q9Y3D6 152 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 FKBP6O75344 327 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 LRIG2O94898 1065 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 LTFP02788 710 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 MYL3P08590 195 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 NCAM1P13591 858 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 GABRB3P28472 473 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 ABCG1P45844 678 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 NUDT2P50583 147 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 UPP1Q16831 310 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 NXNQ6DKJ4 435 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 TMEM53Q6P2H8 277 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 PGM2L1Q6PCE3 622 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 UGT2A3Q6UWM9 527 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 STRA8Q7Z7C7 330 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 MAPK15Q8TD08 544 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 LPPQ93052 612 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 THAP11Q96EK4 314 aa15.73■□□□□ 0.11
PTBP1-204ENST00000394601 TEKT5Q96M29 485 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms