RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 MYRFQ9Y2G1 1151 aa16.33■□□□□ 0.2
PCDH1-203ENST00000394536 MT-ND1P03886 318 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 CKMT2P17540 419 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 MAP3K10Q02779 954 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 ZNF280DQ6N043 979 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 ZNF410Q86VK4 478 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 SFMBT1Q9UHJ3 866 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 NHSQ6T4R5 1651 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 MYBPHLA2RUH7 354 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 DPYSL4O14531 572 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 PSMA4P25789 261 aaKnown RBP16.32■□□□□ 0.2
PCDH1-203ENST00000394536 MAP4P27816 1152 aaKnown RBP16.32■□□□□ 0.2
PCDH1-203ENST00000394536 EEF1DP29692 281 aaKnown RBP16.32■□□□□ 0.2
PCDH1-203ENST00000394536 LILRA4P59901 499 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 RNF168Q8IYW5 571 aaPredicted RBP16.32■□□□□ 0.2
PCDH1-203ENST00000394536 ZFRQ96KR1 1074 aaKnown RBP16.32■□□□□ 0.2
PCDH1-203ENST00000394536 GALNT8Q9NY28 637 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.32■□□□□ 0.2
PCDH1-203ENST00000394536 TRIM38O00635 465 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 BNIP3LO60238 219 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 CCNT2O60583 730 aaKnown RBP16.32■□□□□ 0.2
PCDH1-203ENST00000394536 TADA2AO75478 443 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 FBXO21O94952 628 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 CPB1P15086 417 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 ATP5F1P24539 256 aaPredicted RBP16.32■□□□□ 0.2
PCDH1-203ENST00000394536 GALK1P51570 392 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 NEDD8Q15843 81 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 PFKFB4Q16877 469 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 NADK2Q4G0N4 442 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 BBS5Q8N3I7 341 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 FAM47BQ8NA70 645 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 DNAJB14Q8TBM8 379 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 PKP2Q99959 881 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 DNAJB4Q9UDY4 337 aa16.32■□□□□ 0.2
PCDH1-203ENST00000394536 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.31■□□□□ 0.2
PCDH1-203ENST00000394536 MSI1O43347 362 aaKnown RBP16.31■□□□□ 0.2
PCDH1-203ENST00000394536 TMCC1O94876 653 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 RBP1P09455 135 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 NFKBIAP25963 317 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 HADHAP40939 763 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 ADARP55265 1226 aaKnown RBP16.31■□□□□ 0.2
PCDH1-203ENST00000394536 USP46P62068 366 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 CDC42EP1Q00587 391 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 TIFABQ6ZNK6 161 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 PIWIL4Q7Z3Z4 852 aaKnown RBP16.31■□□□□ 0.2
PCDH1-203ENST00000394536 CXCL16Q9H2A7 254 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 CXCL11O14625 94 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 NRP1O14786 923 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 PFKMP08237 780 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 SNRPB2P08579 225 aaKnown RBP16.31■□□□□ 0.2
PCDH1-203ENST00000394536 GRAMD4Q6IC98 578 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 EPGNQ6UW88 154 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 CDC26Q8NHZ8 85 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 SLC16A10Q8TF71 515 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 LENG1Q96BZ8 264 aaPredicted RBP16.31■□□□□ 0.2
PCDH1-203ENST00000394536 KLHL5Q96PQ7 755 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 SPC25Q9HBM1 224 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 FAM50BQ9Y247 325 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 PRG3Q9Y2Y8 225 aaPredicted RBP16.31■□□□□ 0.2
PCDH1-203ENST00000394536 HMX2A2RU54 273 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 DAB1O75553 588 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 RHOBTB1O94844 696 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 NFYCQ13952 458 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 IL23RQ5VWK5 629 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 TAS2R42Q7RTR8 314 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 HERC6Q8IVU3 1022 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 CCDC97Q96F63 343 aaPredicted RBP16.31■□□□□ 0.2
PCDH1-203ENST00000394536 EMCNQ9ULC0 261 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 BTRCQ9Y297 605 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 ANKRD6Q9Y2G4 727 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 XIRP1Q702N8 1843 aaKnown RBP16.31■□□□□ 0.2
PCDH1-203ENST00000394536 ADAMTSL1Q8N6G6 1762 aa16.31■□□□□ 0.2
PCDH1-203ENST00000394536 E5RI56 91 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 NR1H2P55055 460 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 CYP51A1Q16850 503 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 KCTD21Q4G0X4 260 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 PGAM4Q8N0Y7 254 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 SLC25A23Q9BV35 468 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 RHOBTB2Q9BYZ6 727 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 PAIP1Q9H074 479 aaKnown RBP16.3■□□□□ 0.2
PCDH1-203ENST00000394536 COQ10BQ9H8M1 238 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 LIN28AQ9H9Z2 209 aaKnown RBP16.3■□□□□ 0.2
PCDH1-203ENST00000394536 RGS18Q9NS28 235 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 OXSMQ9NWU1 459 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 PKD2L2Q9NZM6 624 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 CLOCKO15516 846 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 NDUFS3O75489 264 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 BEST1O76090 585 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 AHSGP02765 367 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 KCNK10P57789 538 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 TLR1Q15399 786 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 SGO1Q5FBB7 561 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 DLG3Q92796 817 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 RPRD1AQ96P16 312 aaPredicted RBP16.3■□□□□ 0.2
PCDH1-203ENST00000394536 VAT1Q99536 393 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 TKTP29401 623 aaKnown RBP16.3■□□□□ 0.2
PCDH1-203ENST00000394536 SCNN1GP51170 649 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 MTTPP55157 894 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 NOMO2Q5JPE7 1267 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 SAMD4BQ5PRF9 694 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms