RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 NAB1Q13506 487 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 PTK2BQ14289 1009 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 NOMO1Q15155 1222 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 SLX4IPQ5VYV7 408 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 KCTD8Q6ZWB6 473 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 CDR2LQ86X02 465 aaPredicted RBP19.09■□□□□ 0.65
HOXC6-202ENST00000394331 CAMK1DQ8IU85 385 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 ELMOD1Q8N336 334 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 DEPDC1BQ8WUY9 529 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 MCRS1Q96EZ8 462 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 SH3YL1Q96HL8 342 aaPredicted RBP19.09■□□□□ 0.65
HOXC6-202ENST00000394331 ADI1Q9BV57 179 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 SDCBP2Q9H190 292 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 RSAD1Q9HA92 442 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 ARMC1Q9NVT9 282 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 MOCS1Q9NZB8 636 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 PCSK1NQ9UHG2 260 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 VPS51Q9UID3 782 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 POU2F3Q9UKI9 436 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 PCDHA11Q9Y5I1 949 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 SNX13Q9Y5W8 968 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 AREL1O15033 823 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 SEC14L2O76054 403 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 HSPA8P11142 646 aaKnown RBP19.09■□□□□ 0.65
HOXC6-202ENST00000394331 MIPP30301 263 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 IDUAP35475 653 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 IFITM2Q01629 132 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 DARS2Q6PI48 645 aaKnown RBP19.09■□□□□ 0.65
HOXC6-202ENST00000394331 ZNF781Q8N8C0 355 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 MAPK15Q8TD08 544 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 TRAPPC12Q8WVT3 735 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 PBXIP1Q96AQ6 731 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 ZNF668Q96K58 619 aaPredicted RBP19.09■□□□□ 0.65
HOXC6-202ENST00000394331 EBNA1BP2Q99848 306 aaKnown RBP19.09■□□□□ 0.65
HOXC6-202ENST00000394331 ZBTB26Q9HCK0 441 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 ATP11BQ9Y2G3 1177 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 DLGAP1O14490 977 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 CILPO75339 1184 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 MICAL2O94851 1124 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 CSPG5O95196 566 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 KRT75O95678 551 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 CHEK2O96017 543 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 HMGCRP04035 888 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 UGT2B4P06133 528 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 NFICP08651 508 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 PRAMEP78395 509 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 ABRAXAS1Q6UWZ7 409 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 NEK10Q6ZWH5 1172 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 C11orf74Q86VG3 221 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 S100ZQ8WXG8 99 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 CEP44Q9C0F1 390 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 DNMT3BQ9UBC3 853 aaKnown RBP19.08■□□□□ 0.65
HOXC6-202ENST00000394331 CNOT6Q9ULM6 557 aaKnown RBP19.08■□□□□ 0.65
HOXC6-202ENST00000394331 USP18Q9UMW8 372 aa19.08■□□□□ 0.65
HOXC6-202ENST00000394331 WDR90Q96KV7 1748 aa19.08■□□□□ 0.64
HOXC6-202ENST00000394331 TRUB2O95900 331 aaKnown RBP19.08■□□□□ 0.64
HOXC6-202ENST00000394331 GJB1P08034 283 aa19.08■□□□□ 0.64
HOXC6-202ENST00000394331 HSPA1AP0DMV8 641 aaKnown RBP19.08■□□□□ 0.64
HOXC6-202ENST00000394331 HSPA1BP0DMV9 641 aaKnown RBP19.08■□□□□ 0.64
HOXC6-202ENST00000394331 VDRP11473 427 aa19.08■□□□□ 0.64
HOXC6-202ENST00000394331 CLCN3P51790 818 aa19.08■□□□□ 0.64
HOXC6-202ENST00000394331 PRKCQQ04759 706 aa19.08■□□□□ 0.64
HOXC6-202ENST00000394331 POU5F1BQ06416 359 aa19.08■□□□□ 0.64
HOXC6-202ENST00000394331 MERTKQ12866 999 aa19.08■□□□□ 0.64
HOXC6-202ENST00000394331 IFNLR1Q8IU57 520 aaPredicted RBP19.08■□□□□ 0.64
HOXC6-202ENST00000394331 GPC2Q8N158 579 aa19.08■□□□□ 0.64
HOXC6-202ENST00000394331 SNX31Q8N9S9 440 aa19.08■□□□□ 0.64
HOXC6-202ENST00000394331 LSM14AQ8ND56 463 aaKnown RBP19.08■□□□□ 0.64
HOXC6-202ENST00000394331 SPATA18Q8TC71 538 aa19.08■□□□□ 0.64
HOXC6-202ENST00000394331 ELOVL4Q9GZR5 314 aa19.08■□□□□ 0.64
HOXC6-202ENST00000394331 A0A0G2JMZ2 1700 aa19.08■□□□□ 0.64
HOXC6-202ENST00000394331 NOTOA8MTQ0 251 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 LACTBL1A8MY62 500 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 SOCS2O14508 198 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 HSPA4LO95757 839 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 ITGB3P05106 788 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 PGK2P07205 417 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 STAG3L1P0CL83 205 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 HLCSP50747 726 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 TMEM192Q8IY95 271 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 ADPGKQ9BRR6 497 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 RAD21L1Q9H4I0 556 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 ASB7Q9H672 318 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 AKIP1Q9NQ31 210 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 RAB6BQ9NRW1 208 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 SARDHQ9UL12 918 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 M0QX08 132 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 TPP1O14773 563 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 CLOCKO15516 846 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 GMNNO75496 209 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 ALDH1A2O94788 518 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 NME3Q13232 169 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 KCTD2Q14681 263 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 TRMT10BQ6PF06 316 aaKnown RBP19.07■□□□□ 0.64
HOXC6-202ENST00000394331 C4orf22Q6V702 233 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 ERMP1Q7Z2K6 904 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 TWNKQ96RR1 684 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 CALN1Q9BXU9 219 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 HOXD1Q9GZZ0 328 aa19.07■□□□□ 0.64
HOXC6-202ENST00000394331 MINDY3Q9H8M7 445 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms