RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PDXKO00764 312 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 GLRA3O75311 464 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 SORBS2O94875 1100 aaKnown RBP7.71□□□□□ -1.17
VTI1A-201ENST00000393077 VAPBO95292 243 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 LDLRP01130 860 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 C8BP07358 591 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 GAP43P17677 238 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 PIK3R1P27986 724 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 GNL1P36915 607 aaPredicted RBP7.71□□□□□ -1.17
VTI1A-201ENST00000393077 CAPZA2P47755 286 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 GPR85P60893 370 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 PSME3P61289 254 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 PPATQ06203 517 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 DBPQ10586 325 aaPredicted RBP7.71□□□□□ -1.17
VTI1A-201ENST00000393077 CDK10Q15131 360 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 FAM91A1Q658Y4 838 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 SEL1L3Q68CR1 1132 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 ZNF517Q6ZMY9 492 aaPredicted RBP7.71□□□□□ -1.17
VTI1A-201ENST00000393077 RASSF6Q6ZTQ3 369 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 ADGRF4Q8IZF3 695 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 LRRC71Q8N4P6 559 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 FAM149B1Q96BN6 582 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 NAA50Q9GZZ1 169 aaKnown RBP7.71□□□□□ -1.17
VTI1A-201ENST00000393077 EXOSC4Q9NPD3 245 aaKnown RBP7.71□□□□□ -1.17
VTI1A-201ENST00000393077 HOXC10Q9NYD6 342 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 RAPGEFL1Q9UHV5 662 aa7.71□□□□□ -1.17
VTI1A-201ENST00000393077 LOC110117498-PIK3R3F6TDL0 507 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 YKT6O15498 198 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 CRCPO75575 148 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 IL7P13232 177 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 DPEP1P16444 411 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 CHRNB2P17787 502 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 EPHA3P29320 983 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 CASP3P42574 277 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 PPP4CP60510 307 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 SEC23AQ15436 765 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 IL17AQ16552 155 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 ESCO2Q56NI9 601 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 EFHC2Q5JST6 749 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 UNC5AQ6ZN44 842 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 PIWIL3Q7Z3Z3 882 aaKnown RBP7.71□□□□□ -1.18
VTI1A-201ENST00000393077 ANKS1BQ7Z6G8 1248 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.71□□□□□ -1.18
VTI1A-201ENST00000393077 SLC20A1Q8WUM9 679 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 GTF2H4Q92759 462 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 MBOAT7Q96N66 472 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF285Q96NJ3 590 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 LPIN3Q9BQK8 851 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF341Q9BYN7 854 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 INO80BQ9C086 356 aaPredicted RBP7.71□□□□□ -1.18
VTI1A-201ENST00000393077 GPBP1L1Q9HC44 474 aaPredicted RBP7.71□□□□□ -1.18
VTI1A-201ENST00000393077 AAASQ9NRG9 546 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 GABBR1Q9UBS5 961 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 PCDHGC3Q9UN70 934 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 TBC1D30Q9Y2I9 924 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 E2F8A0AVK6 867 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 ESYT2A0FGR8 921 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 CYB561D2O14569 222 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 SLC22A1O15245 554 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 TLR3O15455 904 aaKnown RBP7.71□□□□□ -1.18
VTI1A-201ENST00000393077 TGM2P21980 687 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 NUDT1P36639 197 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 ELK3P41970 407 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 ACOT2P49753 483 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 GALEQ14376 348 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 SMAD1Q15797 465 aaKnown RBP7.71□□□□□ -1.18
VTI1A-201ENST00000393077 CYP1B1Q16678 543 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 QRICH1Q2TAL8 776 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 SAMD4BQ5PRF9 694 aaKnown RBP7.71□□□□□ -1.18
VTI1A-201ENST00000393077 KIAA1841Q6NSI8 718 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 ADGRD1Q6QNK2 874 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 C16orf86Q6ZW13 317 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF767PQ75MW2 155 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 EEPD1Q7L9B9 569 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 LYSMD3Q7Z3D4 306 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 KRT73Q86Y46 540 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 CPNE9Q8IYJ1 553 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 GRIN3AQ8TCU5 1115 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 TUBA1CQ9BQE3 449 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 C11orf70Q9BRQ4 267 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 CCDC106Q9BWC9 280 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF395Q9H8N7 513 aaPredicted RBP7.71□□□□□ -1.18
VTI1A-201ENST00000393077 SYTL2Q9HCH5 934 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 PNPOQ9NVS9 261 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 NSMCE4AQ9NXX6 385 aa7.71□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF142P52746 1687 aaPredicted RBP7.71□□□□□ -1.18
VTI1A-201ENST00000393077 LMO7Q8WWI1 1683 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 RAB19A4D1S5 217 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 hCG_2039718K7EN88 272 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 SYNCRIPO60506 623 aaKnown RBP7.7□□□□□ -1.18
VTI1A-201ENST00000393077 CLIC3O95833 236 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 SLURP2P0DP57 97 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 GLRA2P23416 452 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 PPP5CP53041 499 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 TXNL4AP83876 142 aaKnown RBP7.7□□□□□ -1.18
VTI1A-201ENST00000393077 PRKCEQ02156 737 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 QPRTQ15274 297 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 FAM214AQ32MH5 1076 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 GLRA4Q5JXX5 417 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 N4BP2L1Q5TBK1 243 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms