RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 HS3ST4Q9Y661 456 aa15.15■□□□□ 0.02
SCFD2-201ENST00000388940 SQORQ9Y6N5 450 aa15.15■□□□□ 0.02
SCFD2-201ENST00000388940 DOCK4Q8N1I0 1966 aa15.15■□□□□ 0.02
SCFD2-201ENST00000388940 MSI1O43347 362 aaKnown RBP15.14■□□□□ 0.01
SCFD2-201ENST00000388940 STMN1P16949 149 aa15.14■□□□□ 0.01
SCFD2-201ENST00000388940 ITGAXP20702 1163 aa15.14■□□□□ 0.01
SCFD2-201ENST00000388940 ADSLP30566 484 aaPredicted RBP15.14■□□□□ 0.01
SCFD2-201ENST00000388940 PGFP49763 221 aa15.14■□□□□ 0.01
SCFD2-201ENST00000388940 PAPOLAP51003 745 aaKnown RBP15.14■□□□□ 0.01
SCFD2-201ENST00000388940 YWHAHQ04917 246 aaPredicted RBP15.14■□□□□ 0.01
SCFD2-201ENST00000388940 SEL1L3Q68CR1 1132 aa15.14■□□□□ 0.01
SCFD2-201ENST00000388940 MSANTD2Q6P1R3 559 aa15.14■□□□□ 0.01
SCFD2-201ENST00000388940 FRMD7Q6ZUT3 714 aa15.14■□□□□ 0.01
SCFD2-201ENST00000388940 APLFQ8IW19 511 aaPredicted RBP15.14■□□□□ 0.01
SCFD2-201ENST00000388940 CPSF7Q8N684 471 aaKnown RBP15.14■□□□□ 0.01
SCFD2-201ENST00000388940 MICAL1Q8TDZ2 1067 aa15.14■□□□□ 0.01
SCFD2-201ENST00000388940 ITFG2Q969R8 447 aa15.14■□□□□ 0.01
SCFD2-201ENST00000388940 SCYL1Q96KG9 808 aa15.14■□□□□ 0.01
SCFD2-201ENST00000388940 NMUR1Q9HB89 426 aa15.14■□□□□ 0.01
SCFD2-201ENST00000388940 CDH22Q9UJ99 828 aa15.14■□□□□ 0.01
SCFD2-201ENST00000388940 MIA3Q5JRA6 1907 aa15.14■□□□□ 0.01
SCFD2-201ENST00000388940 A0A087X1B8 175 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 FAM95CA0A1B0GW59 222 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 ASGR1P07306 291 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 CHRNGP07510 517 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 TFEBP19484 476 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 MPSTP25325 297 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 MPP1Q00013 466 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 CTBP1Q13363 440 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 ARL13AQ5H913 290 aaPredicted RBP15.13■□□□□ 0.01
SCFD2-201ENST00000388940 KIAA0408Q6ZU52 694 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 MON1AQ86VX9 555 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 MFSD6LQ8IWD5 586 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 DENND6AQ8IWF6 608 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 UMODL1-AS1Q8N2C9 162 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 SLC39A13Q96H72 371 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 OR52B2Q96RD2 323 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 RANBP9Q96S59 729 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 CCDC28BQ9BUN5 200 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 FSD1LQ9BXM9 530 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 SLC25A51Q9H1U9 297 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 MAN1C1Q9NR34 630 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 SCML2Q9UQR0 700 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 TLR6Q9Y2C9 796 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 A0A1W2PQH9 124 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 CCDC78A2IDD5 438 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 E9PBE3 544 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 GRID2O43424 1007 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 DLX3O60479 287 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 KLHL41O60662 606 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 PIGNO95427 931 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 THRAP10827 490 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 SLC2A3P11169 496 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 YY1P25490 414 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 SLC1A2P43004 574 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 CD151P48509 253 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 NDST2P52849 883 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 POU4F1Q01851 419 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 HNRNPDQ14103 355 aaKnown RBP15.13■□□□□ 0.01
SCFD2-201ENST00000388940 CNGA3Q16281 694 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 NAIF1Q69YI7 327 aaPredicted RBP15.13■□□□□ 0.01
SCFD2-201ENST00000388940 CAPRIN2Q6IMN6 1127 aaKnown RBP15.13■□□□□ 0.01
SCFD2-201ENST00000388940 KDELC1Q6UW63 502 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 TMC7Q7Z402 723 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 C14orf80Q86SX3 495 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 FBXW8Q8N3Y1 598 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.13■□□□□ 0.01
SCFD2-201ENST00000388940 KLHDC9Q8NEP7 349 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 FAM210AQ96ND0 272 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 LBHD1Q9BQE6 289 aaPredicted RBP15.13■□□□□ 0.01
SCFD2-201ENST00000388940 FTHL17Q9BXU8 183 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 ZCWPW1Q9H0M4 648 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 TRPV6Q9H1D0 765 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 ATP13A1Q9HD20 1204 aa15.13■□□□□ 0.01
SCFD2-201ENST00000388940 IPO11Q9UI26 975 aaKnown RBP15.13■□□□□ 0.01
SCFD2-201ENST00000388940 FRMPD3Q5JV73 1810 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 TTC3P53804 2025 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 LOC100653049A0A140TA62 436 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 NPHS1O60500 1241 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 PMPCBO75439 489 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 KRT34O76011 436 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 OAZ2O95190 189 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 PEX11BO96011 259 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 SAT1P21673 171 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 SERPINB5P36952 375 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 AVPR1AP37288 418 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 KPNA2P52292 529 aaKnown RBP15.12■□□□□ 0.01
SCFD2-201ENST00000388940 NAGLUP54802 743 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 CRHR2Q13324 411 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 CUL3Q13618 768 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 KCNA10Q16322 511 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 TRIM71Q2Q1W2 868 aaKnown RBP15.12■□□□□ 0.01
SCFD2-201ENST00000388940 CCSAPQ6IQ19 270 aaPredicted RBP15.12■□□□□ 0.01
SCFD2-201ENST00000388940 RGMBQ6NW40 437 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 FAM43BQ6ZT52 329 aaPredicted RBP15.12■□□□□ 0.01
SCFD2-201ENST00000388940 CEP97Q8IW35 865 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 KBTBD2Q8IY47 623 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 ZNF683Q8IZ20 524 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 DCP1BQ8IZD4 617 aaKnown RBP15.12■□□□□ 0.01
SCFD2-201ENST00000388940 DEFB107AQ8IZN7 70 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms