RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 MTA1Q13330 715 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 ZNF460Q14592 562 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 TMEM214Q6NUQ4 689 aaKnown RBP14.03□□□□□ -0.16
SDC1-202ENST00000381150 ELMSAN1Q6PJG2 1045 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 PARP8Q8N3A8 854 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 GPRC5AQ8NFJ5 357 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 CASP10Q92851 521 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 HPDLQ96IR7 371 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 BRD8Q9H0E9 1235 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 PNPLA8Q9NP80 782 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 SACM1LQ9NTJ5 587 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 PLK2Q9NYY3 685 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 ZDHHC2Q9UIJ5 367 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 PCDHB12Q9Y5F1 795 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 A8MU76 341 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 H3BNH8 94 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 HDAC3O15379 428 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 VDRP11473 427 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 SCN1AP35498 2009 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 CASP2P42575 452 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 GALNT18Q6P9A2 607 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 Q6ZNX1 250 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 RAVER1Q8IY67 606 aaKnown RBP14.03□□□□□ -0.16
SDC1-202ENST00000381150 FIBCD1Q8N539 461 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 MCUQ8NE86 351 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 BPIFB6Q8NFQ5 453 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 MS4A4AQ96JQ5 239 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 STN1Q9H668 368 aaKnown RBP14.03□□□□□ -0.16
SDC1-202ENST00000381150 AKT3Q9Y243 479 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 WDR37Q9Y2I8 494 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 GSTT2P0CG29 244 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 GSTT2BP0CG30 244 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 HOXD8P13378 290 aaPredicted RBP14.03□□□□□ -0.16
SDC1-202ENST00000381150 ZNF26P17031 533 aaPredicted RBP14.03□□□□□ -0.16
SDC1-202ENST00000381150 RPL14P50914 215 aaKnown RBP14.03□□□□□ -0.16
SDC1-202ENST00000381150 DMPKQ09013 629 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 BFSP2Q13515 415 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 MAPK11Q15759 364 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 AARS2Q5JTZ9 985 aaKnown RBP14.03□□□□□ -0.16
SDC1-202ENST00000381150 FAM183BPQ6ZVS7 135 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 KDELC2Q7Z4H8 507 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 CDKL3Q8IVW4 592 aaPredicted RBP14.03□□□□□ -0.16
SDC1-202ENST00000381150 SIX6OS1Q8N1H7 587 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 TMCO5AQ8N6Q1 288 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 ACVR1CQ8NER5 493 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 OR52K1Q8NGK4 314 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 RP9Q8TA86 221 aaKnown RBP14.03□□□□□ -0.16
SDC1-202ENST00000381150 FBXL20Q96IG2 436 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 HEPHQ9BQS7 1158 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 CNPY3Q9BT09 278 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 EFHD1Q9BUP0 239 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 OSBPL11Q9BXB4 747 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 KLHL25Q9H0H3 589 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 PCDH12Q9NPG4 1184 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 OLAHQ9NV23 265 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 DAPK2Q9UIK4 370 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 H3BRB1 525 aa14.02□□□□□ -0.16
SDC1-202ENST00000381150 ZNF195O14628 629 aa14.02□□□□□ -0.16
SDC1-202ENST00000381150 C2P06681 752 aa14.02□□□□□ -0.16
SDC1-202ENST00000381150 PSMB4P28070 264 aa14.02□□□□□ -0.16
SDC1-202ENST00000381150 EEF1DP29692 281 aaKnown RBP14.02□□□□□ -0.16
SDC1-202ENST00000381150 TMEM132DQ14C87 1099 aa14.02□□□□□ -0.16
SDC1-202ENST00000381150 PYROXD2Q8N2H3 581 aa14.02□□□□□ -0.16
SDC1-202ENST00000381150 PPP1R10Q96QC0 940 aaKnown RBP14.02□□□□□ -0.16
SDC1-202ENST00000381150 HTR3EA5X5Y0 456 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 SOCS2O14508 198 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 TOR1BO14657 336 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 ADAM23O75077 832 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 E2F6O75461 281 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 POLBP06746 335 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 GP5P40197 560 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 NDST1P52848 882 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 USP10Q14694 798 aaKnown RBP14.02□□□□□ -0.17
SDC1-202ENST00000381150 ZIK1Q3SY52 487 aaPredicted RBP14.02□□□□□ -0.17
SDC1-202ENST00000381150 FSTL4Q6MZW2 842 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 LCLAT1Q6UWP7 414 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 PGAM4Q8N0Y7 254 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 CANT1Q8WVQ1 401 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 FAM149B1Q96BN6 582 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 VPS50Q96JG6 964 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 UPF3AQ9H1J1 476 aaKnown RBP14.02□□□□□ -0.17
SDC1-202ENST00000381150 IARS2Q9NSE4 1012 aaKnown RBP14.02□□□□□ -0.17
SDC1-202ENST00000381150 SLC38A7Q9NVC3 462 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.02□□□□□ -0.17
SDC1-202ENST00000381150 DPP3Q9NY33 737 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 RUVBL2Q9Y230 463 aaKnown RBP14.02□□□□□ -0.17
SDC1-202ENST00000381150 NME7Q9Y5B8 376 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 ST14Q9Y5Y6 855 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 A0A087WXM4 84 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 HTRA2O43464 458 aaPredicted RBP14.02□□□□□ -0.17
SDC1-202ENST00000381150 BCAP31P51572 246 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 GSTM4Q03013 218 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 IFRD2Q12894 506 aaPredicted RBP14.02□□□□□ -0.17
SDC1-202ENST00000381150 ZNF534Q76KX8 674 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 ZNF467Q7Z7K2 595 aaPredicted RBP14.02□□□□□ -0.17
SDC1-202ENST00000381150 CHERPQ8IWX8 916 aaKnown RBP14.02□□□□□ -0.17
SDC1-202ENST00000381150 OR9I1Q8NGQ6 314 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 BORCS5Q969J3 196 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 MFSD3Q96ES6 412 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 ACE2Q9BYF1 805 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms