RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 HORMAD1Q86X24 394 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 CCDC36Q8IYA8 594 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 TRPM4Q8TD43 1214 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 ZSWIM1Q9BR11 485 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 DBNDD1Q9H9R9 158 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 GPN2Q9H9Y4 310 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-204ENST00000380393 GPRC5BQ9NZH0 403 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 WARS2Q9UGM6 360 aaKnown RBP9.48□□□□□ -0.89
PTPRA-204ENST00000380393 SORCS3Q9UPU3 1222 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 PCDHB13Q9Y5F0 798 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 SNX13Q9Y5W8 968 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 KCNE2Q9Y6J6 123 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 CCDC88AQ3V6T2 1871 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 CCDC195A0A1B0GUA6 201 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 HTRA2O43464 458 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-204ENST00000380393 UCHL3P15374 230 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 SPNP16150 400 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 CD40LGP29965 261 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 HOXC13P31276 330 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 MAN1A1P33908 653 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 ZNF76P36508 570 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 AKR1D1P51857 326 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 GPX6P59796 221 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 UBE3AQ05086 875 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 SLC18A2Q05940 514 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 ILF2Q12905 390 aaKnown RBP9.48□□□□□ -0.89
PTPRA-204ENST00000380393 VARS2Q5ST30 1063 aaKnown RBP9.48□□□□□ -0.89
PTPRA-204ENST00000380393 C12orf60Q5U649 245 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 IZUMO3Q5VZ72 239 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 CRLF3Q8IUI8 442 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 TMEM102Q8N9M5 508 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-204ENST00000380393 ZNF384Q8TF68 577 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 PHF21AQ96BD5 680 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 ARHGEF26Q96DR7 871 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 MSANTD3Q96H12 275 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 TRAF4Q9BUZ4 470 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-204ENST00000380393 ZNF395Q9H8N7 513 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-204ENST00000380393 SPC25Q9HBM1 224 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 BLOC1S4Q9NUP1 217 aa9.48□□□□□ -0.89
PTPRA-204ENST00000380393 NCANO14594 1321 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 A0A1W2PRG6 482 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 H0YJX3 145 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 TRDMT1O14717 391 aaKnown RBP9.47□□□□□ -0.89
PTPRA-204ENST00000380393 PTP4A3O75365 173 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 VNN1O95497 513 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 STMN1P16949 149 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 BST1Q10588 318 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 ELOAQ14241 798 aaKnown RBP9.47□□□□□ -0.89
PTPRA-204ENST00000380393 WDR44Q5JSH3 913 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 LGI2Q8N0V4 545 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 MFSD4AQ8N468 514 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 ATG4AQ8WYN0 398 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 MARVELD3Q96A59 401 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 MASTLQ96GX5 879 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 MRM3Q9HC36 420 aaKnown RBP9.47□□□□□ -0.89
PTPRA-204ENST00000380393 ACOXLQ9NUZ1 547 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 COPG2Q9UBF2 871 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 GGA1Q9UJY5 639 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 ASTN2O75129 1339 aaPredicted RBP9.47□□□□□ -0.89
PTPRA-204ENST00000380393 PRSS51A0A1B0GVH4 220 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 KLRG2A4D1S0 409 aaPredicted RBP9.47□□□□□ -0.89
PTPRA-204ENST00000380393 ZBBXA8MT70 800 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 STMND1H3BQB6 276 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 CLIC2O15247 247 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 KRT37O76014 449 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 TDP2O95551 362 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 YES1P07947 543 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 GNAO1P09471 354 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 TMEM253P0C7T8 217 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 SELLP14151 372 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 NPR1P16066 1061 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 PCSK2P16519 638 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 KELP23276 732 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 TSPAN7P41732 249 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 ABCE1P61221 599 aaKnown RBP9.47□□□□□ -0.89
PTPRA-204ENST00000380393 BST2Q10589 180 aaKnown RBP9.47□□□□□ -0.89
PTPRA-204ENST00000380393 PTK6Q13882 451 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 SEMA3AQ14563 771 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 TAGAPQ8N103 731 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 ZNF366Q8N895 744 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 ZNF565Q8N9K5 539 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 BANPQ8N9N5 519 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 CMTM5Q96DZ9 223 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 PPP1R2P1Q96PQ5 205 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 C12orf57Q99622 126 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 MIR1-1HGQ9H1L0 117 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 LRRC19Q9H756 370 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 TLK1Q9UKI8 766 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 MAPRE3Q9UPY8 281 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 MYO3BQ8WXR4 1341 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 ANKRD31Q8N7Z5 1873 aa9.47□□□□□ -0.89
PTPRA-204ENST00000380393 SDR42E2A6NKP2 422 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 PLD2O14939 933 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 KPNA5O15131 536 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 PLA2G6O60733 806 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 PIAS1O75925 651 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 PGRP06401 933 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 USP17L8P0C7I0 530 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 NPR3P17342 541 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 QARSP47897 775 aaKnown RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms