RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 TMLHEQ9NVH6 421 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 ZNF639Q9UID6 485 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 NARSO43776 548 aaKnown RBP13.41□□□□□ -0.26
HIPK3-202ENST00000379016 VIL1P09327 827 aaKnown RBP13.41□□□□□ -0.26
HIPK3-202ENST00000379016 ETS1P14921 441 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 LTKP29376 864 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 HDDC3Q8N4P3 179 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 OR56A4Q8NGH8 313 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 GFM1Q96RP9 751 aaKnown RBP13.41□□□□□ -0.26
HIPK3-202ENST00000379016 ZFP14Q9HCL3 533 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 TBX22Q9Y458 520 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 CIAO1O76071 339 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 GNB3P16520 340 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 RGS21Q2M5E4 152 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 ANKRD26P1Q6NSI1 321 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 C2orf73Q8N5S3 287 aaPredicted RBP13.41□□□□□ -0.26
HIPK3-202ENST00000379016 C1orf216Q8TAB5 229 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 SPATA5L1Q9BVQ7 753 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 ZYG11BQ9C0D3 744 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 VPS4AQ9UN37 437 aa13.41□□□□□ -0.26
HIPK3-202ENST00000379016 IGSF6O95976 241 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 IFNGP01579 166 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 ITIH1P19827 911 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 TLR1Q15399 786 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 GUF1Q8N442 669 aaKnown RBP13.4□□□□□ -0.26
HIPK3-202ENST00000379016 COLGALT1Q8NBJ5 622 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 SELENOMQ8WWX9 145 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 PLEKHG1Q9ULL1 1385 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 STARD13Q9Y3M8 1113 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 NUAK1O60285 661 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 IL1BP01584 269 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 ACAT1P24752 427 aaKnown RBP13.4□□□□□ -0.26
HIPK3-202ENST00000379016 CAPGP40121 348 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 PNPLA4P41247 253 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 VPS72Q15906 364 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 AGBL2Q5U5Z8 902 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 EPS8L3Q8TE67 593 aaKnown RBP13.4□□□□□ -0.26
HIPK3-202ENST00000379016 QRFPRQ96P65 431 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 C9orf16Q9BUW7 83 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 BSDC1Q9NW68 430 aaPredicted RBP13.4□□□□□ -0.26
HIPK3-202ENST00000379016 MLH3Q9UHC1 1453 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 SAGP10523 405 aaPredicted RBP13.4□□□□□ -0.26
HIPK3-202ENST00000379016 MTHFD1P11586 935 aaKnown RBP13.4□□□□□ -0.26
HIPK3-202ENST00000379016 CALB2P22676 271 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 PPP3R1P63098 170 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 PFKPQ01813 784 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 AAGABQ6PD74 315 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 PTCD3Q96EY7 689 aaKnown RBP13.4□□□□□ -0.26
HIPK3-202ENST00000379016 CHP1Q99653 195 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 APBA2Q99767 749 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 FAIM2Q9BWQ8 316 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 ACOT9Q9Y305 439 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 FAM86B2P0C5J1 330 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 UCHL3P15374 230 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 KCNMA1Q12791 1236 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 BNIP1Q12981 228 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 CRY1Q16526 586 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 CES3Q6UWW8 571 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 USP45Q70EL2 814 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 OR8H3Q8N146 312 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 UBR7Q8N806 425 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 OR52K2Q8NGK3 314 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 PLEKHF1Q96S99 279 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 MROH8Q9H579 483 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 GNG13Q9P2W3 67 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 EDC4Q6P2E9 1401 aaKnown RBP13.4□□□□□ -0.26
HIPK3-202ENST00000379016 FOXN1O15353 648 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 EYA4O95677 639 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 SCARF1Q14162 830 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 MTF1Q14872 753 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 RAB39AQ14964 217 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 PLA2G4EQ3MJ16 856 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 RNF43Q68DV7 783 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 USB1Q9BQ65 265 aaKnown RBP13.4□□□□□ -0.26
HIPK3-202ENST00000379016 PPCSQ9HAB8 311 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 TBC1D13Q9NVG8 400 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 MAPRE3Q9UPY8 281 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 TEX14Q8IWB6 1497 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 THP07101 528 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 RAB4AP20338 218 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 POLR2LP62875 67 aaKnown RBP13.4□□□□□ -0.26
HIPK3-202ENST00000379016 FAM187BQ17R55 369 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 METTL21AQ8WXB1 218 aa13.4□□□□□ -0.26
HIPK3-202ENST00000379016 TIMM13Q9Y5L4 95 aaPredicted RBP13.4□□□□□ -0.26
HIPK3-202ENST00000379016 DGAT1O75907 488 aa13.39□□□□□ -0.27
HIPK3-202ENST00000379016 ALDH4A1P30038 563 aa13.39□□□□□ -0.27
HIPK3-202ENST00000379016 OR7D4Q8NG98 312 aa13.39□□□□□ -0.27
HIPK3-202ENST00000379016 SUN3Q8TAQ9 357 aa13.39□□□□□ -0.27
HIPK3-202ENST00000379016 ELMO3Q96BJ8 720 aa13.39□□□□□ -0.27
HIPK3-202ENST00000379016 BRF2Q9HAW0 419 aa13.39□□□□□ -0.27
HIPK3-202ENST00000379016 RGS17Q9UGC6 210 aaPredicted RBP13.39□□□□□ -0.27
HIPK3-202ENST00000379016 CDH9Q9ULB4 789 aa13.39□□□□□ -0.27
HIPK3-202ENST00000379016 RPRD2Q5VT52 1461 aaKnown RBP13.39□□□□□ -0.27
HIPK3-202ENST00000379016 KERAO60938 352 aa13.39□□□□□ -0.27
HIPK3-202ENST00000379016 SLC12A3P55017 1021 aa13.39□□□□□ -0.27
HIPK3-202ENST00000379016 MLLT6P55198 1093 aaPredicted RBP13.39□□□□□ -0.27
HIPK3-202ENST00000379016 ACSM2AQ08AH3 577 aa13.39□□□□□ -0.27
HIPK3-202ENST00000379016 NAB1Q13506 487 aa13.39□□□□□ -0.27
HIPK3-202ENST00000379016 ACSM2BQ68CK6 577 aa13.39□□□□□ -0.27
HIPK3-202ENST00000379016 TRAPPC11Q7Z392 1133 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms