RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 ZNF746Q6NUN9 644 aaPredicted RBP8.82□□□□□ -1
LIG3-202ENST00000378526 DSG4Q86SJ6 1040 aa8.82□□□□□ -1
LIG3-202ENST00000378526 METTL4Q8N3J2 472 aa8.82□□□□□ -1
LIG3-202ENST00000378526 FAM47BQ8NA70 645 aa8.82□□□□□ -1
LIG3-202ENST00000378526 SERAC1Q96JX3 654 aa8.82□□□□□ -1
LIG3-202ENST00000378526 PBDC1Q9BVG4 233 aa8.82□□□□□ -1
LIG3-202ENST00000378526 ELL3Q9HB65 397 aaPredicted RBP8.82□□□□□ -1
LIG3-202ENST00000378526 TMEM45AQ9NWC5 275 aa8.82□□□□□ -1
LIG3-202ENST00000378526 LNPEPQ9UIQ6 1025 aa8.82□□□□□ -1
LIG3-202ENST00000378526 ABCC4O15439 1325 aa8.82□□□□□ -1
LIG3-202ENST00000378526 A0A087WWV3 80 aa8.82□□□□□ -1
LIG3-202ENST00000378526 PDXKO00764 312 aa8.82□□□□□ -1
LIG3-202ENST00000378526 AP2A1O95782 977 aa8.82□□□□□ -1
LIG3-202ENST00000378526 ADNP2Q6IQ32 1131 aa8.82□□□□□ -1
LIG3-202ENST00000378526 TTI2Q6NXR4 508 aa8.82□□□□□ -1
LIG3-202ENST00000378526 PPP1R18Q6NYC8 613 aa8.82□□□□□ -1
LIG3-202ENST00000378526 FAM83HQ6ZRV2 1179 aaPredicted RBP8.82□□□□□ -1
LIG3-202ENST00000378526 RASGEF1AQ8N9B8 481 aa8.82□□□□□ -1
LIG3-202ENST00000378526 HTATIP2Q9BUP3 242 aa8.82□□□□□ -1
LIG3-202ENST00000378526 ANKEF1Q9NU02 776 aa8.82□□□□□ -1
LIG3-202ENST00000378526 POLR1AO95602 1720 aaPredicted RBP8.82□□□□□ -1
LIG3-202ENST00000378526 FGD5Q6ZNL6 1462 aa8.82□□□□□ -1
LIG3-202ENST00000378526 CBX6O95503 412 aa8.82□□□□□ -1
LIG3-202ENST00000378526 UMPSP11172 480 aa8.82□□□□□ -1
LIG3-202ENST00000378526 ACSL1P33121 698 aa8.82□□□□□ -1
LIG3-202ENST00000378526 SULT1E1P49888 294 aa8.82□□□□□ -1
LIG3-202ENST00000378526 RAB27AP51159 221 aa8.82□□□□□ -1
LIG3-202ENST00000378526 MECP2P51608 486 aaKnown RBP8.82□□□□□ -1
LIG3-202ENST00000378526 DDX39BQ13838 428 aaKnown RBP8.82□□□□□ -1
LIG3-202ENST00000378526 ZYXQ15942 572 aaKnown RBP8.82□□□□□ -1
LIG3-202ENST00000378526 FBXO47Q5MNV8 452 aa8.82□□□□□ -1
LIG3-202ENST00000378526 BTBD8Q5XKL5 378 aa8.82□□□□□ -1
LIG3-202ENST00000378526 PAPD4Q6PIY7 484 aaKnown RBP8.82□□□□□ -1
LIG3-202ENST00000378526 USP51Q70EK9 711 aa8.82□□□□□ -1
LIG3-202ENST00000378526 PGAP1Q75T13 922 aa8.82□□□□□ -1
LIG3-202ENST00000378526 CD302Q8IX05 232 aa8.82□□□□□ -1
LIG3-202ENST00000378526 SENP6Q9GZR1 1112 aaPredicted RBP8.82□□□□□ -1
LIG3-202ENST00000378526 ARMC1Q9NVT9 282 aa8.82□□□□□ -1
LIG3-202ENST00000378526 PCDHGB6Q9Y5F9 930 aa8.82□□□□□ -1
LIG3-202ENST00000378526 ABCC1P33527 1531 aa8.82□□□□□ -1
LIG3-202ENST00000378526 CFAP74Q9C0B2 1584 aa8.81□□□□□ -1
LIG3-202ENST00000378526 A0A0A6YYK5 440 aaPredicted RBP8.81□□□□□ -1
LIG3-202ENST00000378526 PNMA6FA0A0J9YX94 578 aa8.81□□□□□ -1
LIG3-202ENST00000378526 RAB19A4D1S5 217 aa8.81□□□□□ -1
LIG3-202ENST00000378526 UGT1A9O60656 530 aa8.81□□□□□ -1
LIG3-202ENST00000378526 UGT1A6P19224 532 aa8.81□□□□□ -1
LIG3-202ENST00000378526 UGT1A1P22309 533 aa8.81□□□□□ -1
LIG3-202ENST00000378526 UGT1A4P22310 534 aa8.81□□□□□ -1
LIG3-202ENST00000378526 VAMP1P23763 118 aa8.81□□□□□ -1
LIG3-202ENST00000378526 UGT1A3P35503 534 aa8.81□□□□□ -1
LIG3-202ENST00000378526 ARCN1P48444 511 aaKnown RBP8.81□□□□□ -1
LIG3-202ENST00000378526 ETV1P50549 477 aa8.81□□□□□ -1
LIG3-202ENST00000378526 THOP1P52888 689 aa8.81□□□□□ -1
LIG3-202ENST00000378526 C1QBPQ07021 282 aaKnown RBP8.81□□□□□ -1
LIG3-202ENST00000378526 PPP1R15BQ5SWA1 713 aa8.81□□□□□ -1
LIG3-202ENST00000378526 DNAJB7Q7Z6W7 309 aaPredicted RBP8.81□□□□□ -1
LIG3-202ENST00000378526 C11orf96Q7Z7L8 435 aa8.81□□□□□ -1
LIG3-202ENST00000378526 COMTD1Q86VU5 262 aa8.81□□□□□ -1
LIG3-202ENST00000378526 SLC4A11Q8NBS3 891 aa8.81□□□□□ -1
LIG3-202ENST00000378526 MFSD8Q8NHS3 518 aa8.81□□□□□ -1
LIG3-202ENST00000378526 UGT1A7Q9HAW7 530 aa8.81□□□□□ -1
LIG3-202ENST00000378526 UGT1A10Q9HAW8 530 aa8.81□□□□□ -1
LIG3-202ENST00000378526 UGT1A8Q9HAW9 530 aa8.81□□□□□ -1
LIG3-202ENST00000378526 GNG13Q9P2W3 67 aa8.81□□□□□ -1
LIG3-202ENST00000378526 ABCD2Q9UBJ2 740 aa8.81□□□□□ -1
LIG3-202ENST00000378526 MROH2BQ7Z745 1585 aa8.81□□□□□ -1
LIG3-202ENST00000378526 ADAM10O14672 748 aa8.81□□□□□ -1
LIG3-202ENST00000378526 RIPK2O43353 540 aa8.81□□□□□ -1
LIG3-202ENST00000378526 MED24O75448 989 aa8.81□□□□□ -1
LIG3-202ENST00000378526 CREB5Q02930 508 aa8.81□□□□□ -1
LIG3-202ENST00000378526 USP4Q13107 963 aa8.81□□□□□ -1
LIG3-202ENST00000378526 SLC16A9Q7RTY1 509 aa8.81□□□□□ -1
LIG3-202ENST00000378526 FBXO36Q8NEA4 188 aa8.81□□□□□ -1
LIG3-202ENST00000378526 OR56A4Q8NGH8 313 aa8.81□□□□□ -1
LIG3-202ENST00000378526 MALSU1Q96EH3 234 aa8.81□□□□□ -1
LIG3-202ENST00000378526 ERVK-11Q9UQG0 969 aa8.81□□□□□ -1
LIG3-202ENST00000378526 NAALADL1Q9UQQ1 740 aa8.81□□□□□ -1
LIG3-202ENST00000378526 NCAPD2Q15021 1401 aa8.81□□□□□ -1
LIG3-202ENST00000378526 EMSYQ7Z589 1322 aa8.81□□□□□ -1
LIG3-202ENST00000378526 ZC3H4Q9UPT8 1303 aaKnown RBP8.81□□□□□ -1
LIG3-202ENST00000378526 HSPA12AO43301 675 aa8.81□□□□□ -1
LIG3-202ENST00000378526 SLC2A2P11168 524 aaPredicted RBP8.81□□□□□ -1
LIG3-202ENST00000378526 PDK2Q15119 407 aa8.81□□□□□ -1
LIG3-202ENST00000378526 PDXDC2PQ6P474 469 aa8.81□□□□□ -1
LIG3-202ENST00000378526 LRRN1Q6UXK5 716 aa8.81□□□□□ -1
LIG3-202ENST00000378526 TMC3Q7Z5M5 1100 aa8.81□□□□□ -1
LIG3-202ENST00000378526 KLF6Q99612 283 aaPredicted RBP8.81□□□□□ -1
LIG3-202ENST00000378526 VPS25Q9BRG1 176 aa8.81□□□□□ -1
LIG3-202ENST00000378526 SLA2Q9H6Q3 261 aa8.81□□□□□ -1
LIG3-202ENST00000378526 CFAP97Q9P2B7 532 aa8.81□□□□□ -1
LIG3-202ENST00000378526 ANGPT4Q9Y264 503 aa8.81□□□□□ -1
LIG3-202ENST00000378526 TRPM2O94759 1503 aa8.81□□□□□ -1
LIG3-202ENST00000378526 EFCAB9A8MZ26 197 aa8.81□□□□□ -1
LIG3-202ENST00000378526 SH2B2O14492 632 aaPredicted RBP8.81□□□□□ -1
LIG3-202ENST00000378526 RBP3P10745 1247 aa8.81□□□□□ -1
LIG3-202ENST00000378526 HK1P19367 917 aa8.81□□□□□ -1
LIG3-202ENST00000378526 TWF1Q12792 350 aa8.81□□□□□ -1
LIG3-202ENST00000378526 GCKRQ14397 625 aa8.81□□□□□ -1
LIG3-202ENST00000378526 GRK1Q15835 563 aa8.81□□□□□ -1
LIG3-202ENST00000378526 MFSD7Q6UXD7 560 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms