RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 NT5DC4Q86YG4 428 aa8.21□□□□□ -1.09
CKAP2-203ENST00000378037 PSTKQ8IV42 348 aaKnown RBP8.21□□□□□ -1.09
CKAP2-203ENST00000378037 PGBD3Q8N328 593 aa8.21□□□□□ -1.09
CKAP2-203ENST00000378037 FITM2Q8N6M3 262 aa8.21□□□□□ -1.09
CKAP2-203ENST00000378037 OR4K2Q8NGD2 314 aa8.21□□□□□ -1.09
CKAP2-203ENST00000378037 CYB5D2Q8WUJ1 264 aa8.21□□□□□ -1.09
CKAP2-203ENST00000378037 DNAJC1Q96KC8 554 aaKnown RBP8.21□□□□□ -1.09
CKAP2-203ENST00000378037 TCF25Q9BQ70 676 aa8.21□□□□□ -1.09
CKAP2-203ENST00000378037 ACBD6Q9BR61 282 aa8.21□□□□□ -1.09
CKAP2-203ENST00000378037 TRIM8Q9BZR9 551 aa8.21□□□□□ -1.09
CKAP2-203ENST00000378037 OLA1Q9NTK5 396 aaKnown RBP8.21□□□□□ -1.09
CKAP2-203ENST00000378037 THEGQ9P2T0 379 aa8.21□□□□□ -1.09
CKAP2-203ENST00000378037 XPR1Q9UBH6 696 aa8.21□□□□□ -1.09
CKAP2-203ENST00000378037 PCDHB12Q9Y5F1 795 aa8.21□□□□□ -1.09
CKAP2-203ENST00000378037 RFXAPO00287 272 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 CES2O00748 559 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 SNX2O60749 519 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 DAB1O75553 588 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 CHRNGP07510 517 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 SERPINF2P08697 491 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 PAMP19021 973 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 EFNA1P20827 205 aaPredicted RBP8.21□□□□□ -1.1
CKAP2-203ENST00000378037 CLNS1AP54105 237 aaKnown RBP8.21□□□□□ -1.1
CKAP2-203ENST00000378037 CLDN10P78369 228 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 CDH17Q12864 832 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 ART3Q13508 389 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 AP5B1Q2VPB7 878 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 ATG16L1Q676U5 607 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 MON1AQ86VX9 555 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 NAT8LQ8N9F0 302 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 ZSCAN18Q8TBC5 510 aaPredicted RBP8.21□□□□□ -1.1
CKAP2-203ENST00000378037 RAB3IL1Q8TBN0 382 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 PGM2Q96G03 612 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 OXNAD1Q96HP4 312 aaPredicted RBP8.21□□□□□ -1.1
CKAP2-203ENST00000378037 SH3GL2Q99962 352 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 TBL1YQ9BQ87 522 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 ACAT2Q9BWD1 397 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 ROPN1BQ9BZX4 212 aaPredicted RBP8.21□□□□□ -1.1
CKAP2-203ENST00000378037 EPB41L4BQ9H329 900 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 FBXO44Q9H4M3 255 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 ACSS3Q9H6R3 686 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 ROPN1Q9HAT0 212 aaPredicted RBP8.21□□□□□ -1.1
CKAP2-203ENST00000378037 CD274Q9NZQ7 290 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 CCDC167Q9P0B6 97 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 COL11A1P12107 1806 aaPredicted RBP8.21□□□□□ -1.1
CKAP2-203ENST00000378037 KCNU1A8MYU2 1149 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 SNX3O60493 162 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 OPHN1O60890 802 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 UGT2B4P06133 528 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 C2P06681 752 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 STMN1P16949 149 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 PGM1P36871 562 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 FAM83EQ2M2I3 478 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 RABGAP1LQ5R372 815 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 CLEC6AQ6EIG7 209 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 FAM124AQ86V42 546 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 CAND1Q86VP6 1230 aaKnown RBP8.21□□□□□ -1.1
CKAP2-203ENST00000378037 PLD6Q8N2A8 252 aaKnown RBP8.21□□□□□ -1.1
CKAP2-203ENST00000378037 FAM156AQ8NDB6 213 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 PIP4K2CQ8TBX8 421 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 GFM2Q969S9 779 aaKnown RBP8.21□□□□□ -1.1
CKAP2-203ENST00000378037 SGSM3Q96HU1 749 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 BBS2Q9BXC9 721 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 SNX15Q9NRS6 342 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 RGS18Q9NS28 235 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 KLC4Q9NSK0 619 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 KANSL3Q9P2N6 904 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 CRLS1Q9UJA2 301 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 FBXW11Q9UKB1 542 aa8.21□□□□□ -1.1
CKAP2-203ENST00000378037 TRBV23OR9-2A0A075B6M9 112 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 FAM95CA0A1B0GW59 222 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 MTMR11A4FU01 709 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 KRT87PA6NCN2 255 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 UNCXA6NJT0 531 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 I6L893 689 aaPredicted RBP8.2□□□□□ -1.1
CKAP2-203ENST00000378037 MTA2O94776 668 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 TAC1P20366 129 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 CES1P23141 567 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 RPL9P32969 192 aaKnown RBP8.2□□□□□ -1.1
CKAP2-203ENST00000378037 MAGEA9P43362 315 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 RBM20Q5T481 1227 aaKnown RBP8.2□□□□□ -1.1
CKAP2-203ENST00000378037 DNAJB7Q7Z6W7 309 aaPredicted RBP8.2□□□□□ -1.1
CKAP2-203ENST00000378037 NXNL1Q96CM4 212 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 ZYG11BQ9C0D3 744 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 USP29Q9HBJ7 922 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.2□□□□□ -1.11e-7■■□□□ 12.5
CKAP2-203ENST00000378037 LSM7Q9UK45 103 aaKnown RBP8.2□□□□□ -1.1
CKAP2-203ENST00000378037 DOCK1Q14185 1865 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 IRAK2O43187 625 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 ITM2AO43736 263 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 SIX3O95343 332 aaPredicted RBP8.2□□□□□ -1.1
CKAP2-203ENST00000378037 PIGNO95427 931 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 C8AP07357 584 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 NUDT17P0C025 328 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 KCNE1P15382 129 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 MPSTP25325 297 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 NUDT2P50583 147 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 PFKPQ01813 784 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 RASA2Q15283 850 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 RBBP5Q15291 538 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms