RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SNAP47Q5SQN1 464 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 PHF13Q86YI8 300 aaPredicted RBP13.76□□□□□ -0.21
GPC6-201ENST00000377047 SLC9A9Q8IVB4 645 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 GMIPQ9P107 970 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 GRM6O15303 877 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 SLC25A14O95258 325 aaPredicted RBP13.76□□□□□ -0.21
GPC6-201ENST00000377047 INHAP05111 366 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 VAV1P15498 845 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 ZACNQ401N2 412 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 FAM151BQ6UXP7 276 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 GPR141Q7Z602 305 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 DHFR2Q86XF0 187 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 EPHX4Q8IUS5 362 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 ZNF670Q9BS34 389 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 FAM20BO75063 409 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 PIGNO95427 931 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 FASP25445 335 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 CRATP43155 626 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 AGMOQ6ZNB7 445 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 LRRC49Q8IUZ0 686 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 MTERF3Q96E29 417 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 MAML3Q96JK9 1138 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 ABCG4Q9H172 646 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 SLC12A4Q9UP95 1085 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 INVSQ9Y283 1065 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 ERCC2P18074 760 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 WASP42768 502 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 MSLNQ13421 630 aaPredicted RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 C1DQ13901 141 aaKnown RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 PTPRNQ16849 979 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 PSRC1Q6PGN9 363 aaPredicted RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 PTGR2Q8N8N7 351 aaPredicted RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 OXNAD1Q96HP4 312 aaPredicted RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 LGMNQ99538 433 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 ANKZF1Q9H8Y5 726 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 PAPOLBQ9NRJ5 636 aaKnown RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 FFAR3O14843 346 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 GPR42O15529 346 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 NOMO3P69849 1222 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 MEA1Q16626 185 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 PLA2G4EQ3MJ16 856 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 LBX2Q6XYB7 198 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 MACC1Q6ZN28 852 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 GFM2Q969S9 779 aaKnown RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 CERS2Q96G23 380 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 FAM84AQ96KN4 292 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 MORF4L1Q9UBU8 362 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 CCDC189A1A4V9 331 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 QSOX1O00391 747 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 KLRC4O43908 158 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 UQCRBP14927 111 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 EPORP19235 508 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 LPOP22079 712 aaPredicted RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 CLCN5P51795 746 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 SULT2A1Q06520 285 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 SMARCB1Q12824 385 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 TBX2Q13207 712 aaPredicted RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 OTUD3Q5T2D3 398 aaPredicted RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 KYAT3Q6YP21 454 aaKnown RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 HDAC7Q8WUI4 952 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 DLGAP2Q9P1A6 1054 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 VAV3Q9UKW4 847 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 PCDHB9Q9Y5E1 797 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 SMIM28A0A1B0GU29 152 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 ERBB2P04626 1255 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 PRKCIP41743 596 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 RGS1Q08116 209 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 MIIPQ5JXC2 388 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 ALLCQ8N6M5 410 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 ATAD1Q8NBU5 361 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 KLHL4Q9C0H6 718 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 TKTP29401 623 aaKnown RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 SCTRP47872 440 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 NEK3P51956 506 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 COPZ1P61923 177 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 IFI35P80217 286 aaPredicted RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 CDK16Q00536 496 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 XKR6Q5GH73 641 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 ATAT1Q5SQI0 421 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 LRRC38Q5VT99 294 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 LRRC55Q6ZSA7 311 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 SIX5Q8N196 739 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 MFSD14AQ96MC6 490 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 INPP4AQ96PE3 977 aaPredicted RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 FAIM2Q9BWQ8 316 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 GPN3Q9UHW5 284 aaPredicted RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 TMCO1Q9UM00 188 aa13.75□□□□□ -0.21
GPC6-201ENST00000377047 COPG1Q9Y678 874 aaKnown RBP13.75□□□□□ -0.21
GPC6-201ENST00000377047 KCNH1O95259 989 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 JAK1P23458 1154 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 PTPN4P29074 926 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 RPL7AP62424 266 aaKnown RBP13.74□□□□□ -0.21
GPC6-201ENST00000377047 POU5F2Q8N7G0 328 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 ACTRT2Q8TDY3 377 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 KLHL5Q96PQ7 755 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 SLC4A5Q9BY07 1137 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 RABGEF1Q9UJ41 708 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 SLC27A6Q9Y2P4 619 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 MDM4O15151 490 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 CORO1AP31146 461 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms