RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TRIM38O00635 465 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 AP1G1O43747 822 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 DAB2P98082 770 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 TARDBPQ13148 414 aaKnown RBP eCLIP21.4■■□□□ 1.02
VSX1-201ENST00000376707 PROX2Q3B8N5 592 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 WDR59Q6PJI9 974 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 LEKR1Q6ZMV7 388 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 Q6ZSR6 202 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 PTAR1Q7Z6K3 402 aaPredicted RBP21.4■■□□□ 1.02
VSX1-201ENST00000376707 SLFN11Q7Z7L1 901 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 ZNF354CQ86Y25 554 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 OR2AP1Q8NGE2 309 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 LRIG1Q96JA1 1093 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 UCKL1Q9NWZ5 548 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 NEU3Q9UQ49 428 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 HS3ST3A1Q9Y663 406 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 ZFYVE26Q68DK2 2539 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 SIGLEC16A6NMB1 481 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 C16orf96A6NNT2 1141 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 KRIT1O00522 736 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 NEMP1O14524 444 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 FFAR2O15552 330 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 PAK4O96013 591 aaPredicted RBP21.39■■□□□ 1.01
VSX1-201ENST00000376707 GSRP00390 522 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 ACP1P24666 158 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 GKP32189 559 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 SNRPD1P62314 119 aaKnown RBP21.39■■□□□ 1.01
VSX1-201ENST00000376707 SGCGQ13326 291 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 ANO6Q4KMQ2 910 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 EFHC2Q5JST6 749 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 DNAJC24Q6P3W2 148 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 SCYL2Q6P3W7 929 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 ZSCAN30Q86W11 494 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 DCP2Q8IU60 420 aaKnown RBP21.39■■□□□ 1.01
VSX1-201ENST00000376707 SLC22A18ASQ8N1D0 253 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 OR4C6Q8NH72 309 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 RAB7BQ96AH8 199 aa21.39■■□□□ 1.01
VSX1-201ENST00000376707 DSPP15924 2871 aaKnown RBP21.38■■□□□ 1.01
VSX1-201ENST00000376707 TSPAN6O43657 245 aa21.38■■□□□ 1.01
VSX1-201ENST00000376707 PIAS2O75928 621 aa21.38■■□□□ 1.01
VSX1-201ENST00000376707 ALPPL2P10696 532 aa21.38■■□□□ 1.01
VSX1-201ENST00000376707 EPHB2P29323 1055 aa21.38■■□□□ 1.01
VSX1-201ENST00000376707 C1QBPQ07021 282 aaKnown RBP21.38■■□□□ 1.01
VSX1-201ENST00000376707 FGL2Q14314 439 aa21.38■■□□□ 1.01
VSX1-201ENST00000376707 ZNF805Q5CZA5 627 aa21.38■■□□□ 1.01
VSX1-201ENST00000376707 KYAT3Q6YP21 454 aaKnown RBP21.38■■□□□ 1.01
VSX1-201ENST00000376707 MON1BQ7L1V2 547 aa21.38■■□□□ 1.01
VSX1-201ENST00000376707 PDZD3Q86UT5 571 aa21.38■■□□□ 1.01
VSX1-201ENST00000376707 IFT43Q96FT9 208 aa21.38■■□□□ 1.01
VSX1-201ENST00000376707 BMFQ96LC9 184 aa21.38■■□□□ 1.01
VSX1-201ENST00000376707 AGPAT1Q99943 283 aa21.38■■□□□ 1.01
VSX1-201ENST00000376707 SCUBE2Q9NQ36 999 aa21.38■■□□□ 1.01
VSX1-201ENST00000376707 DNAJC28Q9NX36 388 aa21.38■■□□□ 1.01
VSX1-201ENST00000376707 GOLGA4Q13439 2230 aaKnown RBP21.37■■□□□ 1.01
VSX1-201ENST00000376707 POM121BA6NF01 834 aa21.37■■□□□ 1.01
VSX1-201ENST00000376707 ZSCAN5CA6NGD5 496 aaPredicted RBP21.37■■□□□ 1.01
VSX1-201ENST00000376707 CCP110O43303 1012 aa21.37■■□□□ 1.01
VSX1-201ENST00000376707 BUB1O43683 1085 aa21.37■■□□□ 1.01
VSX1-201ENST00000376707 KDELR3O43731 214 aa21.37■■□□□ 1.01
VSX1-201ENST00000376707 POP4O95707 220 aaKnown RBP21.37■■□□□ 1.01
VSX1-201ENST00000376707 UGT2B4P06133 528 aa21.37■■□□□ 1.01
VSX1-201ENST00000376707 ABL2P42684 1182 aa21.37■■□□□ 1.01
VSX1-201ENST00000376707 ZNF143P52747 638 aaPredicted RBP21.37■■□□□ 1.01
VSX1-201ENST00000376707 MYLK3Q32MK0 819 aa21.37■■□□□ 1.01
VSX1-201ENST00000376707 ZNF542PQ5EBM4 170 aa21.37■■□□□ 1.01
VSX1-201ENST00000376707 PYROXD2Q8N2H3 581 aa21.37■■□□□ 1.01
VSX1-201ENST00000376707 MCEEQ96PE7 176 aa21.37■■□□□ 1.01
VSX1-201ENST00000376707 OSBPL1AQ9BXW6 950 aa21.37■■□□□ 1.01
VSX1-201ENST00000376707 RTN4Q9NQC3 1192 aaKnown RBP21.37■■□□□ 1.01
VSX1-201ENST00000376707 IPO11Q9UI26 975 aaKnown RBP21.37■■□□□ 1.01
VSX1-201ENST00000376707 MYO6Q9UM54 1294 aa21.37■■□□□ 1.01
VSX1-201ENST00000376707 AK5Q9Y6K8 562 aa21.37■■□□□ 1.01
VSX1-201ENST00000376707 APC2O95996 2303 aa21.37■■□□□ 1.01
VSX1-201ENST00000376707 TCRBV5S1A1TA0A578 114 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 NEMP2A6NFY4 417 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 IGLON5A6NGN9 336 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 FPGTO14772 594 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 RAD51BO15315 384 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 CCDC172P0C7W6 258 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 HOXB3P14651 431 aaPredicted RBP21.36■■□□□ 1.01
VSX1-201ENST00000376707 FERP16591 822 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 DESP17661 470 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 RABIFP47224 123 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 HNRNPKP61978 463 aaKnown RBP eCLIP21.36■■□□□ 1.01
VSX1-201ENST00000376707 E2F1Q01094 437 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 ATXN7L2Q5T6C5 722 aaPredicted RBP21.36■■□□□ 1.01
VSX1-201ENST00000376707 TMC6Q7Z403 805 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 RTL3Q8N8U3 475 aaKnown RBP21.36■■□□□ 1.01
VSX1-201ENST00000376707 ARHGEF26Q96DR7 871 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 GDAP1L1Q96MZ0 367 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 KLHL32Q96NJ5 620 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 C1QTNF2Q9BXJ5 285 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 CLCA2Q9UQC9 943 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 ITM2BQ9Y287 266 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 DOCK9Q9BZ29 2069 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 CACNA1GO43497 2377 aa21.36■■□□□ 1.01
VSX1-201ENST00000376707 SMTNL1A8MU46 457 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 TEX33O43247 280 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 CREB3O43889 395 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 TMCC1O94876 653 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms