RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 SLC8A2Q9UPR5 921 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 DGKBQ9Y6T7 804 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 FFAR3O14843 346 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 GPR42O15529 346 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 ZNF862O60290 1169 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 TOMM70O94826 608 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 CRTAMO95727 393 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 F9P00740 461 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 LDLRP01130 860 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 MT-ND1P03886 318 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 CHRNGP07510 517 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 SLC26A2P50443 739 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 GSCP56915 257 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 SLC25A11Q02978 314 aaKnown RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 MRPL28Q13084 256 aaKnown RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 MARC1Q5VT66 337 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 UGT3A1Q6NUS8 523 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 DEFB132Q7Z7B7 95 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 MICU2Q8IYU8 434 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 RP9Q8TA86 221 aaKnown RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 KRT8P05787 483 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 CCDC159P0C7I6 412 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 ZNF37AP17032 561 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 ARF4P18085 180 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 RGS2P41220 211 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 RGS4P49798 205 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 NDUFV1P49821 464 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 SCNN1GP51170 649 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 KLF10Q13118 480 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 ARHGAP17Q68EM7 881 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 FAM81AQ8TBF8 368 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 DDX1Q92499 740 aaKnown RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 NXNL1Q96CM4 212 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 GPR20Q99678 358 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 MRPL57Q9BQC6 102 aaKnown RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 MTF2Q9Y483 593 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 MAFBQ9Y5Q3 323 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 TTC24A2A3L6 582 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 TGFB3P10600 412 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 DGCR6Q14129 220 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 ARHGEF7Q14155 803 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 AARS2Q5JTZ9 985 aaKnown RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 LDLRAP1Q5SW96 308 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 ANO7Q6IWH7 933 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 HERC6Q8IVU3 1022 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 NAT8LQ8N9F0 302 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 SLC25A23Q9BV35 468 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 RRN3Q9NYV6 651 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 SF3B1O75533 1304 aaKnown RBP eCLIP6.61□□□□□ -1.352e-6■■■■■ 205
SMC1A-202ENST00000375340 TK2O00142 265 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 MAP3K13O43283 966 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 ARHGEF9O43307 516 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 APOA1P02647 267 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 MRPS5P82675 430 aaKnown RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 KCNJ11Q14654 390 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 SLC9A4Q6AI14 798 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 OVOS1Q6IE37 1185 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 ZYG11AQ6WRX3 759 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 CUZD1Q86UP6 607 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 ZNF410Q86VK4 478 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 ZNF567Q8N184 647 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 ANKRD52Q8NB46 1076 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 DLG3Q92796 817 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 NKD2Q969F2 451 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 RMND5AQ9H871 391 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 SSU72Q9NP77 194 aaKnown RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 ZNF358Q9NW07 568 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 TEKT2Q9UIF3 430 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 BCLAF3A2AJT9 711 aaKnown RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 MAP1SQ66K74 1059 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 SLC44A2Q8IWA5 706 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 PQLC1Q8N2U9 271 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 TMEM216Q9P0N5 145 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 SNX8Q9Y5X2 465 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 SEC22BO75396 215 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 MBL2P11226 248 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 NCK1P16333 377 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 TPSB2P20231 275 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 ITGAXP20702 1163 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 LMO2P25791 158 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 NOS2P35228 1153 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 CCR10P46092 362 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 ZNF157P51786 506 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 TPSAB1Q15661 275 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 PERM1Q5SV97 790 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 OR9Q1Q8NGQ5 310 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 SLC47A1Q96FL8 570 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 SENP8Q96LD8 212 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 PEBP4Q96S96 227 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 CIB1Q99828 191 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 ANAPC2Q9UJX6 822 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 PCDHGC3Q9UN70 934 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 IRF6O14896 467 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 SYNCRIPO60506 623 aaKnown RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 MAGEC1O60732 1142 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 GCATO75600 419 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 DCTN2Q13561 401 aaKnown RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 SEMA5AQ13591 1074 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 PLCL1Q15111 1095 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 DLG2Q15700 870 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms