RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 CHURC1Q8WUH1 139 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 PIBF1Q8WXW3 757 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 PHKBQ93100 1093 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 TIFAQ96CG3 184 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 VPS50Q96JG6 964 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 ZC3H10Q96K80 434 aaKnown RBP4.94□□□□□ -1.62
PMS1-202ENST00000374826 SELENOOQ9BVL4 669 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 TEX13BQ9BXU2 312 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 UNKQ9C0B0 810 aaKnown RBP4.94□□□□□ -1.62
PMS1-202ENST00000374826 SLC38A10Q9HBR0 1119 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 PNPLA8Q9NP80 782 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 RNF146Q9NTX7 359 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 GAR1Q9NY12 217 aaKnown RBP4.94□□□□□ -1.62
PMS1-202ENST00000374826 MAD2L2Q9UI95 211 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 CCPG1Q9ULG6 757 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 HPSEQ9Y251 543 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 RIPK3Q9Y572 518 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 LTBP2Q14767 1821 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 TANC1Q9C0D5 1861 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 WDR19Q8NEZ3 1342 aa4.94□□□□□ -1.62
PMS1-202ENST00000374826 SIP14410 1827 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 CCDC187A0A096LP49 1063 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 KLRF2D3W0D1 207 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 FCHO1O14526 889 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 ZBTB43O43298 467 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 EPB41L2O43491 1005 aaKnown RBP4.93□□□□□ -1.62
PMS1-202ENST00000374826 PLEKHA8P1O95397 391 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 PGK2P07205 417 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 HMGB1P09429 215 aaKnown RBP4.93□□□□□ -1.62
PMS1-202ENST00000374826 HOXD10P28358 340 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 RBL1P28749 1068 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 LIFRP42702 1097 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 HTRA4P83105 476 aaPredicted RBP4.93□□□□□ -1.62
PMS1-202ENST00000374826 TXNL4AP83876 142 aaKnown RBP4.93□□□□□ -1.62
PMS1-202ENST00000374826 CFHR3Q02985 330 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 TROAPQ12815 778 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 DAG1Q14118 895 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 GRB14Q14449 540 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 KCNB1Q14721 858 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 CLCA4Q14CN2 919 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 MFSD13AQ14CX5 517 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 ARHGEF6Q15052 776 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 CCL14Q16627 93 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 SLC35G1Q2M3R5 365 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 QRICH1Q2TAL8 776 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 SLC9C1Q4G0N8 1177 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 VSTM1Q6UX27 236 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 NOL8Q76FK4 1167 aaKnown RBP4.93□□□□□ -1.62
PMS1-202ENST00000374826 RUFY3Q7L099 469 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 RNF44Q7L0R7 432 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 ADGRF4Q8IZF3 695 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 KRT78Q8N1N4 520 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 C12orf76Q8N812 135 aaPredicted RBP4.93□□□□□ -1.62
PMS1-202ENST00000374826 PNPLA1Q8N8W4 532 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 C16orf52Q8NHV5 167 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 TRIB2Q92519 343 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 TTC17Q96AE7 1141 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 COQ8BQ96D53 544 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 ZDHHC12Q96GR4 267 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 ABHD8Q96I13 439 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 RANBP17Q9H2T7 1088 aaKnown RBP4.93□□□□□ -1.62
PMS1-202ENST00000374826 METTL14Q9HCE5 456 aaKnown RBP4.93□□□□□ -1.62
PMS1-202ENST00000374826 VAT1LQ9HCJ6 419 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 GJD2Q9UKL4 321 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 CORO2BQ9UQ03 480 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 SLC27A6Q9Y2P4 619 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 CYP46A1Q9Y6A2 500 aa4.93□□□□□ -1.62
PMS1-202ENST00000374826 MKI67P46013 3256 aaKnown RBP4.92□□□□□ -1.62
PMS1-202ENST00000374826 hCG_1642624A0A1W2PR95 340 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 SLC15A5A6NIM6 579 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 RHPN2P1A8MT19 583 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 FOXN3O00409 490 aaPredicted RBP4.92□□□□□ -1.62
PMS1-202ENST00000374826 ATP2A1O14983 1001 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 CYTH3O43739 400 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 PLA2G6O60733 806 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 SLC25A27O95847 323 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 ICAM1P05362 532 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 CALM1P0DP23 149 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 CALM2P0DP24 149 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 CALM3P0DP25 149 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 ATF7P17544 494 aaPredicted RBP4.92□□□□□ -1.62
PMS1-202ENST00000374826 PSMA5P28066 241 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 KIF5BP33176 963 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 COPB2P35606 906 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 RGS2P41220 211 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 COPAP53621 1224 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 OAZ1P54368 228 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 PRMT2P55345 433 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 GHRHRQ02643 423 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 KCTD2Q14681 263 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 PKN2Q16513 984 aaKnown RBP4.92□□□□□ -1.62
PMS1-202ENST00000374826 SYNE3Q6ZMZ3 975 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 TMTC3Q6ZXV5 915 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 DPP9Q86TI2 863 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 TET1Q8NFU7 2136 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.92□□□□□ -1.62
PMS1-202ENST00000374826 USP6NLQ92738 828 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 CUL5Q93034 780 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 IQCDQ96DY2 449 aa4.92□□□□□ -1.62
PMS1-202ENST00000374826 VCPIP1Q96JH7 1222 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms