RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 MT-CO3P00414 261 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 RHOQP17081 205 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 SOX5P35711 763 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 ABL2P42684 1182 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 MAPKAPK2P49137 400 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 NRG1Q02297 640 aaPredicted RBP16.41■□□□□ 0.22
HDAC8-202ENST00000373556 FZD2Q14332 565 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 CDKAL1Q5VV42 579 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 KYAT3Q6YP21 454 aaKnown RBP16.41■□□□□ 0.22
HDAC8-202ENST00000373556 FAM172AQ8WUF8 416 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 APOLD1Q96LR9 279 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 PCDHB18PQ96TA0 734 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 OSBPL2Q9H1P3 480 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 GPR27Q9NS67 375 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 TMEM248Q9NWD8 314 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 NLGN3Q9NZ94 848 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 PCDHB1Q9Y5F3 818 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 HS3ST3A1Q9Y663 406 aa16.41■□□□□ 0.22
HDAC8-202ENST00000373556 LY6G6EA0A0G2JKS1 128 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 AP1G1O43747 822 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 UGT2B4P06133 528 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 PLEKP08567 350 aaPredicted RBP16.4■□□□□ 0.22
HDAC8-202ENST00000373556 ALPPL2P10696 532 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 CKMT1AP12532 417 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 ETFBP38117 255 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 PTPN9P43378 593 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 HDAC4P56524 1084 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 E2F1Q01094 437 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 PTP4A2Q12974 167 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 SGCGQ13326 291 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 CT47A1Q5JQC4 288 aaPredicted RBP16.4■□□□□ 0.22
HDAC8-202ENST00000373556 LRRC73Q5JTD7 316 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 TPRG1LQ5T0D9 272 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 FKBP15Q5T1M5 1219 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 ATXN7L2Q5T6C5 722 aaPredicted RBP16.4■□□□□ 0.22
HDAC8-202ENST00000373556 LRRC69Q6ZNQ3 347 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 STRADAQ7RTN6 431 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 DCP2Q8IU60 420 aaKnown RBP16.4■□□□□ 0.22
HDAC8-202ENST00000373556 PYROXD2Q8N2H3 581 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 NETO2Q8NC67 525 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 ENOX1Q8TC92 643 aaKnown RBP16.4■□□□□ 0.22
HDAC8-202ENST00000373556 VOPP1Q96AW1 172 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 ISG20Q96AZ6 181 aaKnown RBP16.4■□□□□ 0.22
HDAC8-202ENST00000373556 TBC1D31Q96DN5 1066 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 IFT43Q96FT9 208 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 KLF6Q99612 283 aaPredicted RBP16.4■□□□□ 0.22
HDAC8-202ENST00000373556 C1QTNF2Q9BXJ5 285 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 U3KQA8 63 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 SHROOM3Q8TF72 1996 aa16.4■□□□□ 0.22
HDAC8-202ENST00000373556 GCN1Q92616 2671 aaKnown RBP16.39■□□□□ 0.21
HDAC8-202ENST00000373556 SPTY2D1-AS1A0A0U1RR47 76 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 K7ESM1 405 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 NEMP1O14524 444 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 FPGTO14772 594 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 SCAMP1O15126 338 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 SPINT1O43278 529 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 OPA1O60313 960 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 RAMP2O60895 175 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 KRT3P12035 628 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 UNGP13051 313 aaPredicted RBP16.39■□□□□ 0.21
HDAC8-202ENST00000373556 RFC1P35251 1148 aaPredicted RBP16.39■□□□□ 0.21
HDAC8-202ENST00000373556 STAT1P42224 750 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 NSFP46459 744 aaKnown RBP16.39■□□□□ 0.21
HDAC8-202ENST00000373556 HNRNPKP61978 463 aaKnown RBP eCLIP16.39■□□□□ 0.21
HDAC8-202ENST00000373556 PDE1CQ14123 709 aaPredicted RBP16.39■□□□□ 0.21
HDAC8-202ENST00000373556 POLD3Q15054 466 aaPredicted RBP16.39■□□□□ 0.21
HDAC8-202ENST00000373556 ZNF805Q5CZA5 627 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 PARGQ86W56 976 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 ZNF354CQ86Y25 554 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 CACTIN-AS1Q8N1I8 211 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 ZNF548Q8NEK5 533 aaPredicted RBP16.39■□□□□ 0.21
HDAC8-202ENST00000373556 OR2AP1Q8NGE2 309 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 FAM174AQ8TBP5 190 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 CENPIQ92674 756 aaPredicted RBP16.39■□□□□ 0.21
HDAC8-202ENST00000373556 KLHL32Q96NJ5 620 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 MAGEH1Q9H213 219 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 FANCLQ9NW38 375 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 ADAM22Q9P0K1 906 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 IPO11Q9UI26 975 aaKnown RBP16.39■□□□□ 0.21
HDAC8-202ENST00000373556 KLF15Q9UIH9 416 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 HPCAL4Q9UM19 191 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 SIK3Q9Y2K2 1263 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 RAI2Q9Y5P3 530 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 PTPRQQ9UMZ3 2332 aa16.39■□□□□ 0.21
HDAC8-202ENST00000373556 NEMP2A6NFY4 417 aa16.38■□□□□ 0.21
HDAC8-202ENST00000373556 RRP8O43159 456 aaKnown RBP16.38■□□□□ 0.21
HDAC8-202ENST00000373556 TSPAN6O43657 245 aa16.38■□□□□ 0.21
HDAC8-202ENST00000373556 GSRP00390 522 aa16.38■□□□□ 0.21
HDAC8-202ENST00000373556 CSF2P04141 144 aa16.38■□□□□ 0.21
HDAC8-202ENST00000373556 TPM2P07951 284 aa16.38■□□□□ 0.21
HDAC8-202ENST00000373556 NME1P15531 152 aaKnown RBP16.38■□□□□ 0.21
HDAC8-202ENST00000373556 GPD1P21695 349 aa16.38■□□□□ 0.21
HDAC8-202ENST00000373556 RABIFP47224 123 aa16.38■□□□□ 0.21
HDAC8-202ENST00000373556 GEMIN4P57678 1058 aaKnown RBP16.38■□□□□ 0.21
HDAC8-202ENST00000373556 SNRPD1P62314 119 aaKnown RBP16.38■□□□□ 0.21
HDAC8-202ENST00000373556 SYCP1Q15431 976 aa16.38■□□□□ 0.21
HDAC8-202ENST00000373556 MYLK3Q32MK0 819 aa16.38■□□□□ 0.21
HDAC8-202ENST00000373556 WDR59Q6PJI9 974 aa16.38■□□□□ 0.21
HDAC8-202ENST00000373556 TRIM72Q6ZMU5 477 aa16.38■□□□□ 0.21
HDAC8-202ENST00000373556 PLPP6Q8IY26 295 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms