RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 LSMEM2Q8N112 164 aa24.12■■□□□ 1.45
CDK9-201ENST00000373264 FAM136AQ96C01 138 aa24.12■■□□□ 1.45
CDK9-201ENST00000373264 GPR78Q96P69 363 aa24.12■■□□□ 1.45
CDK9-201ENST00000373264 DNAJB4Q9UDY4 337 aa24.12■■□□□ 1.45
CDK9-201ENST00000373264 TCAF1Q9Y4C2 921 aa24.12■■□□□ 1.45
CDK9-201ENST00000373264 KCNU1A8MYU2 1149 aa24.12■■□□□ 1.45
CDK9-201ENST00000373264 ATP5BP06576 529 aaKnown RBP24.12■■□□□ 1.45
CDK9-201ENST00000373264 TAS2R39P59534 338 aa24.12■■□□□ 1.45
CDK9-201ENST00000373264 PRKCZQ05513 592 aa24.12■■□□□ 1.45
CDK9-201ENST00000373264 KLF10Q13118 480 aa24.12■■□□□ 1.45
CDK9-201ENST00000373264 ALFQ53S48 1182 aa24.12■■□□□ 1.45
CDK9-201ENST00000373264 CNSTQ6PJW8 725 aa24.12■■□□□ 1.45
CDK9-201ENST00000373264 UPF3AQ9H1J1 476 aaKnown RBP24.12■■□□□ 1.45
CDK9-201ENST00000373264 IPO11Q9UI26 975 aaKnown RBP24.12■■□□□ 1.45
CDK9-201ENST00000373264 COX4I1P13073 169 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 ZNF135P52742 658 aaPredicted RBP24.11■■□□□ 1.45
CDK9-201ENST00000373264 BRMS1LQ5PSV4 323 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 LRRC8EQ6NSJ5 796 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 RGMBQ6NW40 437 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 LDB1Q86U70 411 aaPredicted RBP24.11■■□□□ 1.45
CDK9-201ENST00000373264 ZNF598Q86UK7 904 aaKnown RBP24.11■■□□□ 1.45
CDK9-201ENST00000373264 CIR1Q86X95 450 aaPredicted RBP24.11■■□□□ 1.45
CDK9-201ENST00000373264 ELMO2Q96JJ3 720 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 CATSPERBQ9H7T0 1116 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 SPC25Q9HBM1 224 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 TCF7L2Q9NQB0 619 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 BATF3Q9NR55 127 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 LAMA2P24043 3122 aaKnown RBP24.11■■□□□ 1.45
CDK9-201ENST00000373264 PATJQ8NI35 1801 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 TARM1B6A8C7 271 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 GRID2O43424 1007 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 ANXA9O76027 345 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 LRRC36Q1X8D7 754 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 LSM12Q3MHD2 195 aaKnown RBP24.11■■□□□ 1.45
CDK9-201ENST00000373264 MFSD14CQ5VZR4 134 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 TMC7Q7Z402 723 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 SCML4Q8N228 414 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 CCNYL1Q8N7R7 359 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 RTL3Q8N8U3 475 aaKnown RBP24.11■■□□□ 1.45
CDK9-201ENST00000373264 PPHLN1Q8NEY8 458 aaKnown RBP24.11■■□□□ 1.45
CDK9-201ENST00000373264 ANKRD27Q96NW4 1050 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 ILKAPQ9H0C8 392 aaPredicted RBP24.11■■□□□ 1.45
CDK9-201ENST00000373264 CDH22Q9UJ99 828 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 DSEQ9UL01 958 aa24.11■■□□□ 1.45
CDK9-201ENST00000373264 MATN2O00339 956 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 SEPT4O43236 478 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 PEX11BO96011 259 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 RAB27AP51159 221 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 WNT3AP56704 352 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 SLC10A7Q0GE19 358 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 SLC12A1Q13621 1099 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 CCNIQ14094 377 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 CLLU1OSQ5K130 101 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 LIPMQ5VYY2 423 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 RANBP10Q6VN20 620 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 RNF135Q8IUD6 432 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 SH3RF2Q8TEC5 729 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 STYXQ8WUJ0 223 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 HMCESQ96FZ2 354 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 NT5MQ9NPB1 228 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 TREX1Q9NSU2 369 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 ZNF212Q9UDV6 495 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 NOD1Q9Y239 953 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 DPPA5A6NC42 116 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 TMEM114B3SHH9 223 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 ITKQ08881 620 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 DRC3Q9H069 523 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 ACOT9Q9Y305 439 aa24.1■■□□□ 1.45
CDK9-201ENST00000373264 FGF10O15520 208 aaPredicted RBP24.09■■□□□ 1.45
CDK9-201ENST00000373264 MAP3K13O43283 966 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 LUC7L3O95232 432 aaKnown RBP24.09■■□□□ 1.45
CDK9-201ENST00000373264 TFEBP19484 476 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 GLDCP23378 1020 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 CYP2C18P33260 490 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 RAB10P61026 200 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 PDCD2Q16342 344 aaPredicted RBP24.09■■□□□ 1.45
CDK9-201ENST00000373264 PSMD5Q16401 504 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 AFMIDQ63HM1 303 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 ATAD1Q8NBU5 361 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 PABPC5Q96DU9 382 aaKnown RBP24.09■■□□□ 1.45
CDK9-201ENST00000373264 SUDS3Q9H7L9 328 aaPredicted RBP24.09■■□□□ 1.45
CDK9-201ENST00000373264 GMIPQ9P107 970 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 SSX2IPQ9Y2D8 614 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 NEBLO76041 1014 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 HMBSP08397 361 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 MSX2P35548 267 aaPredicted RBP24.09■■□□□ 1.45
CDK9-201ENST00000373264 OR1G1P47890 313 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 PSEN1P49768 467 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 MLLT6P55198 1093 aaPredicted RBP24.09■■□□□ 1.45
CDK9-201ENST00000373264 DSC2Q02487 901 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 C6orf163Q5TEZ5 329 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 CNTN4Q8IWV2 1026 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 KLHDC9Q8NEP7 349 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 HEXDCQ8WVB3 486 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 SPDL1Q96EA4 605 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 OLFM1Q99784 485 aa24.09■■□□□ 1.45
CDK9-201ENST00000373264 AIM2O14862 343 aa24.08■■□□□ 1.45
CDK9-201ENST00000373264 CD86P42081 329 aa24.08■■□□□ 1.45
CDK9-201ENST00000373264 RPL14P50914 215 aaKnown RBP24.08■■□□□ 1.45
CDK9-201ENST00000373264 GEMP55040 296 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms